Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_89999
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Entry
DICPUDRAFT_89999 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K14406
cleavage stimulation factor subunit 1
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DICPUDRAFT_89999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_89999
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DICPUDRAFT_89999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Cytochrom_D1
RMC1_N
Tricorn_2nd
Beta-prop_NUP159_NUP214
Ge1_WD40
eIF2A
CSTF1_dimer
Beta-prop_Nup120_160
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
10509047
NCBI-ProteinID:
XP_003292867
JGI:
Dicpu1_89999
UniProt:
F0ZZM4
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MKEEQRDLYSLIINQLVYDGFLNEAIKISESTMIPCPLKNEATNKLLSIYQSATSTPGGR
SNFTSMDLDEDAGSQVGSGGTSNISNSGKNLIDDIINSKDSLDLDDLNQQNSSESSNKVQ
PTVSFLTKFITTHKNACRCAKFSWDGKYVATGSSDTSIKLLDVNKMRNYNQTKNETTEDS
APSRPVIRTFYDHTQPINDLDFHPSAPILSSASKDGTIRFYDYKSSLKRSFKYIQDSHSI
RTINFHPCGDMILAGTDHNMIRLYNVNTFQSFTARKVNEHHHAAINQVRFSLDGGIFASC
SKDNTIKIWDANNFQLINTFNAPHSNKEPTTVQISRNQKYLLSCGRDSMVKLWEITSGRL
IYSINTGVNQSGGQNKNRISATFNYTEDFIITNDEQPSVCVVYNSRTREQVQKLSGHNNT
VRYIAASPVENALMTCSLDHRGRFWTEDTLTLQQQSSSLPTTTITTKEE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacaaagagatttatattcacttattataaatcaattggtatatgatggg
tttttaaacgaagctataaagattagtgaatcaacaatgattccatgtccgttaaaaaac
gaagcaactaataaattattatcaatctatcaatcagctacatcgacaccaggtggaaga
tcaaactttacctcaatggacctagatgaagatgcaggttcacaagttggtagtggaggc
acatcaaatatttcaaatagtggtaaaaacttaattgacgatataataaactcaaaagat
tcattagatttagatgacctgaatcaacaaaactcaagcgaatcatcaaataaagttcaa
ccaactgtatcatttttaaccaaatttattacaactcataaaaatgcatgtagatgcgct
aaatttagttgggatggtaaatatgtcgctacaggttcatcagatacctcaatcaaacta
ttagatgtaaataaaatgagaaattataatcaaacaaagaatgaaactactgaagattca
gcaccatcaagacctgtaattagaacattttatgatcatacacagccaatcaatgattta
gactttcatccatcagcaccaattctttcatctgcctcaaaagatggtaccattagattt
tatgattacaaatcatccctcaaacgttcattcaagtatattcaagatagtcacagtatt
agaacaattaactttcatccatgtggagatatgattttagcaggtactgaccacaatatg
attcgtctctataatgtgaacacattccaatcatttacagctagaaaagttaatgaacac
catcatgctgcaattaatcaagttagattctcattagatggtggtatatttgcaagttgc
tccaaagataatacaatcaaaatatgggatgctaacaatttccaattgatcaatacattt
aatgcaccacattcaaataaagaaccaacaactgtacaaatttcacgtaatcaaaaatat
cttttatcgtgtggtcgtgattcaatggttaaactttgggaaattacctcaggtagatta
atatattcaattaatacaggtgtcaatcagtctggtggtcaaaataaaaatagaatttca
gcaacctttaattatactgaagactttatcatcaccaatgatgaacaaccatcagtatgt
gtagtttataattcaagaacaagagaacaagtccaaaaattatctggtcataataataca
gtacgttatatagcggcatcacctgtcgaaaatgccttaatgacatgcagtctcgatcat
agaggaagattttggactgaggatactttaacattacaacaacaatcatcatctttacca
acaacaacaataacaacaaaagaagaataa
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