Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_90890
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Entry
DICPUDRAFT_90890 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DICPUDRAFT_90890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpp03032
]
DICPUDRAFT_90890
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_90890
DNA replication proteins [BR:
dpp03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
DICPUDRAFT_90890
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
DICPUDRAFT_90890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
PTCB-BRCT
LIG3_BRCT
BRCT_3
RTT107_BRCT_5
RRM_Nup35
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
10510718
NCBI-ProteinID:
XP_003294915
JGI:
Dicpu1_90890
UniProt:
F1A5H1
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MVGSQLQLQPQQPIFSNLRFYLQESFVSKNSQQAEQLTRVINKHGGKRLFSSSSEGALIY
LFNDFTTQEFEVAKNQGHPIIGIKYLVECAQKNRPINFDMLEQHPIYSDCLFGVVVSTFG
FTSEANQEIVNIVQYLSGEYAQKLSTRVTHLIVNTEYDPSHSKTIELARNNNIPLVIPAW
VSQCFQDSIIHDYRQFSAVFYNCIICTSGFQNTEKKEIKEGITCRGGTISGDYNAEVQIL
ITNSSNSDKYAAAKANNIPIVSFEWYKDCINTGLFRDFSIYSINNGIIQTLPYQPQSKQQ
LYLQQQPLQQQQQQQQLYQPFQTPPSLQRQLSQSQQRVPENKYKPTPMPSTTQISKYTIP
TAISTTTTNFTIPQQQHYQQQQNQFHNNNEFNNSDSSNNQIILHSSSMENELAKKQQELF
YGKNILIKGFPEEELNQVILHVSKYAQVIDEHSIPSEWTSTNMDIHYIMAPHEKNINLNE
GCSGIPVVTTDWFDRCINSCQIIDPNEAPIYSPLPNLSVFKGLKITSEGFSENEERPIRA
TAKLLGATYLGKKFGKGTTHLVCSSRGESYTLSLGKKIPVVTVDWLFESARAGRRLDETN
FSLNKLISNGTENDFSIITNNNNDKNDNDKNDNDNSNNNSINIFKGFTIFISSKIIHSAE
KYIKYIEYLGGEYTLSAFDKITHYITNEYDHLETQNFIDANFVQVSPKWLESCWGSKSLL
SENDFQPLKIVNEEDSLPTIQSLAKTPSQLFNANSTQEKIIKTNTITTTIEDIMVEDNIA
LNSSSASSKGFDKIFKALSTLPVHNKQPHSKIGINKNRIEYYNQNKLSIVPKINKPSLNI
SSLIDWEKSERDDSDSDSEPMKIDDDSVSSTSFNSVSLNNSVAISNNGDFISDPEEDSSQ
NLFKEYQASLETSSQMITYGNETEILRKKKLLESYYSTSGQSSSKHPPSSTLSSNLNKGN
DSVAENILNMLTKPTQHETNETLNKGPSAIKSTMIFVLSGFADSDELARYTAMLLRFGGF
LESSINKDVTHVITKQPSRSEKVMGGSAAGSWILKPSFLVVSNEKGVLEKEVDHQWNEES
YCGDPKIDLWINSSLKCQRIVAQNGRKIFDLARIAFSSKNIHTFEAWKKILSCGNAELFE
VGAIKSLDELKDKRITHYIYFNTKETDPIYNLIDKNPSAGIQVLLTNTITKHLNNGEYLI
PLKKKKKS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggtgggatctcaattacaattacaaccacaacaacccattttttcaaatttaagattt
tatctacaagaatcatttgtttcaaaaaactctcaacaggcagagcaattaacaagggta
atcaataagcatggtggcaaaagattgttttcatcttcttcagaaggtgcattaatatat
ttgtttaatgattttacaacacaagagtttgaagtagcaaaaaatcaaggacacccaatt
ataggtattaaatatttagtcgaatgtgcacagaaaaacagaccaattaattttgatatg
ctagaacaacatccaatctattcagattgtttatttggcgttgtagtttcaacatttggg
ttcacatccgaagccaatcaagaaatagttaacatagtacagtatttaagtggagagtat
gcacaaaagctttcaactcgagtcacacatttaatagttaatacagagtatgatccatct
cattccaaaactattgagttggccagaaataataatattcctctggttattcctgcatgg
gttagtcaatgttttcaagattcaataatccatgattatagacaattctctgctgttttt
tataattgtattatttgtacaagtggctttcaaaatacagagaaaaaagaaattaaagaa
ggtataacatgcagaggaggcactatttcgggtgattataatgcagaagttcaaatctta
attacaaattcatcaaatagcgacaaatatgcagcagcaaaagcaaataatattccaatt
gtttcatttgaatggtacaaagattgtatcaatactggtttatttagagattttagtatt
tattcaataaacaatggtatcattcaaactctgccatatcaaccacaatctaaacaacaa
ctctacctgcaacaacaaccactacaacagcaacagcaacaacaacaattatatcaacca
tttcaaacacccccaagtttacaaagacagctttcgcaatcacaacaaagagtcccagaa
aataaatacaaaccaactccaatgccaagtacaactcaaatatcaaaatatacaatacca
acagcaatatcaacaacaacaacaaattttaccataccacaacagcaacattaccaacaa
caacaaaatcaatttcataataataacgaatttaataatagtgatagtagtaacaatcaa
attatattacattcaagttcaatggaaaatgaattagccaaaaaacaacaagaattattt
tatggtaaaaatattttaattaaagggttccccgaagaagagctaaatcaagttatactc
catgtatcaaaatatgctcaagttattgacgagcatagtatcccaagcgaatggacctcc
acaaatatggatattcattacattatggctcctcacgaaaaaaatatcaatttaaatgaa
ggttgttccggaataccggttgttactaccgattggtttgatagatgcataaattcttgt
caaattatagatccaaacgaagctccaatctattcaccattaccaaatttatctgtattc
aaaggtttaaagattacctccgaaggattctccgaaaatgaagagcgtccaattagagcc
actgctaaactcttgggggcaacatatttgggtaaaaaatttggcaaaggaacaactcat
ttagtctgctcttctagaggtgaatcttatacattgtcattgggtaaaaaaattccggtt
gtaactgttgattggttgttcgaatctgcgcgtgcaggcagaagattggatgaaacaaat
ttctcattaaataaattaatatcaaatggtacagaaaatgattttagtataataacaaat
aacaacaacgacaaaaatgacaacgacaaaaatgacaacgacaatagtaataataactca
attaatatttttaaaggttttacaatatttatttcaagtaaaatcattcactcagccgaa
aaatatattaaatatattgaatatttgggtggtgagtatactttatcagcatttgataaa
ataactcactatatcacaaatgaatatgaccatctcgaaactcaaaattttattgatgca
aatttcgttcaagtatccccaaaatggttagaaagttgttggggctcaaaatctttatta
tccgagaatgattttcaacctttaaaaatcgtaaacgaggaagattcacttccaactatt
caatctttagctaaaacaccatcacaattattcaatgccaactcgacccaagaaaaaatt
attaaaacaaacacaattaccacaacaatagaggatattatggttgaagataatatagct
ttaaatagttcatctgcatcatcaaaaggttttgataaaatttttaaagctttatcaact
ttaccagtacataataaacaaccccattcaaagattggaattaataaaaaccgtatcgag
tattataatcaaaataaactttcaattgttccaaagatcaataagccatcattaaatatt
tcatcacttatcgattgggagaaatctgaaagagatgactcagactcagactcagaacca
atgaagatagatgatgactctgtttcaagtactagttttaatagtgtaagcttaaacaac
tctgtggcaattagtaataacggtgattttatttcagatccagaagaagatagttcccaa
aatctctttaaagaatatcaagcatcactcgaaactagctctcaaatgattacttatgga
aatgaaacggaaatattaaggaagaaaaagcttttggaatcttattattcaacttcaggg
cagagctcttcaaaacatccaccctcatcgacactttcatcaaatttaaacaaaggaaat
gacagtgtggcagaaaatattttaaatatgttaactaaaccaactcaacatgaaaccaat
gaaactttaaataaaggaccttctgcaataaaatcaacaatgatttttgttttatctggt
tttgctgatagtgacgaattggcaagatatacagccatgcttttaagatttggtggcttt
ttagaaagtagtataaataaagatgttactcatgtcataaccaaacaaccatcaagaagt
gaaaaagttatgggtggttcagctgcagggtcgtggatacttaaaccatcatttttagtt
gtatcaaatgaaaaaggagttcttgaaaaagaagtggatcatcaatggaatgaagagtca
tactgtggtgatcctaaaatcgatttgtggattaactcctcactaaaatgtcaaaggata
gttgctcaaaatggcagaaagattttcgatcttgctagaatcgcatttagttcaaaaaat
atccatacctttgaagcatggaaaaagattctttcttgtggcaatgctgaattgtttgaa
gttggtgctatcaaaagtctcgacgagctcaaggataaacgtattactcactatatatat
ttcaatacaaaagaaaccgatcctatatataatttaatagataaaaacccaagtgctggt
attcaagttttattaacaaatactattacaaaacatttaaacaatggagaatatcttata
ccattaaaaaaaaaaaaaaaaagttaa
DBGET
integrated database retrieval system
