Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_96425
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Entry
DICPUDRAFT_96425 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03022
Basal transcription factors
dpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICPUDRAFT_96425
09124 Replication and repair
03420 Nucleotide excision repair
DICPUDRAFT_96425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpp03021
]
DICPUDRAFT_96425
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_96425
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DICPUDRAFT_96425
Transcription machinery [BR:
dpp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DICPUDRAFT_96425
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DICPUDRAFT_96425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
10509534
NCBI-ProteinID:
XP_003283591
JGI:
Dicpu1_96425
UniProt:
F0Z866
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MTDSRKRKDRSTNTTKTYNTWTDFEEELEESGEFNQSIKKTNSVTSNNNNINTETEGKGS
FHDFSKKCGLKKDDKTRPLWVCPDGHIFLETFSPIYKQASDFLVAISEPVCRPQLIHEYQ
LTPYSLYAAVSVGLETNDIITVLNRLSKLYLPKEVEQFIRQCTQSYGKVKLVLQKNKYFV
ESAYPEVLEFLLKDSTIASSRIKPTLEESVIDPKTGLIINKVEIVGAQISGGLQANQSLD
PVLKNDALTSLLEEEEEDTVNNSDQHFHSFEINSQMVEEVKKRCIQLDYPVLEEYDFRND
TVNPNLNIDLKPTTMIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLSGITAACTVKKS
ILVLCTSAVSVEQWKYQFKLWSNIEEKMISKFTSDNKEKLCSLAGVTITTYTMVAFGGRR
SADSLKIMNEITNREWGLVLLDEVHVVPAAMFRKVLTVTKAHCKLGLTATLLREDEKIQD
LNFLIGPKLYEANWLDLQKSGFLANVSCSEVWCPMSAEFYKEYLINDSQCKKKLLYTMNP
NKFRACEYLIKFHEQRGDKIIVFSDNVYALQKYAKGLGKYFIYGPTSGHERMSILSKFQH
DPKVRTIFISKVGDTSIDIPEATVIIQVSSHYGSRRQEAQRLGRILRPKPKSDGLYNAFF
YSLVSKDTQEMYYSTKRQQFLIDQGYSFKVISELPGLDQDPTLKYTSKQEQLELLGQVLG
EGEDSGKNETLEEDFDDITRGGTAKKQKPGTNPTAVSRTTGGSMKALSGANDVNYMEYQT
PSIYNKNRPLKK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcaagaaaaagaaaagatagatcaactaatacaactaaaacatataataca
tggacagattttgaagaagaattagaagaatcaggggaatttaatcaatctataaaaaaa
acaaatagtgttaccagtaacaataataatataaataccgaaacagaaggaaaaggatca
tttcacgatttttcaaagaaatgtggtttaaagaaagatgataaaacgagaccattatgg
gtatgtccagatggacacatttttttagaaactttttcaccaatttataaacaagcatca
gattttttggtcgcaatttcagaaccagtttgcagaccacagttaattcatgaataccag
ctaacaccgtattcattgtatgcagcggtatcagtaggtttggagaccaatgacattatt
acagtattaaatagattatcaaaactatatttgccaaaagaagtagagcaattcatccga
caatgtacacaaagttatggtaaagtcaaactagtattacaaaagaataaatatttcgta
gagtctgcatatcccgaggtactagagtttcttttaaaagattctacaattgcatcatcc
agaatcaagccaacactcgaagagtctgttattgatccaaaaactggtttaattattaat
aaagtagaaattgttggtgcacaaattagtggtggccttcaagctaatcaatcattagat
ccagttttaaaaaatgatgcacttacatcacttttggaagaggaggaagaagatacagtt
aacaactctgatcaacattttcattcattcgaaattaattctcaaatggtcgaagaggta
aagaagcgttgtattcaattggattacccagtattggaagagtatgattttcgtaatgac
acagttaatcctaatttaaatattgatttaaagccaactacaatgattcgtccatatcaa
gaaaagtcgttatctaagatgtttggtaatggtcgtgctcgttcaggaattattgtttta
ccttgtggtgctggtaagtcgttgagtggtatcacagcggcatgcactgtcaaaaagagt
atcttggttttgtgtacatctgctgtatctgtagagcaatggaagtatcaattcaaatta
tggagtaatattgaagagaaaatgatttctaaattcacaagtgacaataaagaaaaactt
tgtagcttggcaggtgtcaccattacaacctatactatggtagcttttggtggtagacgt
tcagcagactctttaaaaattatgaacgaaattacaaatagagaatggggtttggtatta
ttagacgaggtacacgtagttccagctgcaatgtttagaaaggttttaacagtaacaaag
gctcattgtaaattgggtctcactgcaacattgttacgtgaagatgaaaagattcaggat
ttaaatttccttattggtccaaagctttatgaggccaattggttagatcttcaaaaatca
ggtttccttgccaatgtatcatgttctgaagtatggtgtccaatgagtgctgagttttat
aaagagtatctcatcaatgacagtcaatgcaaaaagaagcttttatacactatgaaccca
aataagttccgtgcttgcgaatatttaattaaattccacgaacaaagaggtgataagatt
attgtattctctgacaacgtttatgctcttcaaaagtatgccaagggtttaggtaaatat
ttcatctatggtccaacatcaggtcacgaaagaatgagtattctatcaaagttccaacat
gatccaaaggttagaactattttcatctcaaaagttggtgatacatctatcgatatccca
gaagccacagtcatcattcaggtttcatctcattatggttcacgtcgtcaagaggctcaa
cgtcttggtcgtattttacgtccaaaaccaaagtctgatggtctttacaatgcattcttt
tattcattggtctctaaagacacacaggaaatgtattatagtactaaaagacaacagttt
ttaattgaccaaggttacagtttcaaagttatttccgaattaccaggtcttgatcaagat
ccaacccttaaatacacttcaaaacaggaacaattggaattattgggtcaagttttaggt
gaaggcgaggatagtggtaaaaatgaaacactcgaagaagatttcgatgatattactcgt
ggtggtacagctaaaaaacaaaaaccaggtaccaatccaactgctgttagtagaactact
ggtggttcaatgaaggctttatctggtgcaaatgatgttaattatatggaatatcaaaca
ccttcaatttataataaaaatcgtccactaaaaaaataa
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integrated database retrieval system
