Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_96440
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Entry
DICPUDRAFT_96440 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03040
Spliceosome
dpp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_96440
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DICPUDRAFT_96440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_96440
04121 Ubiquitin system [BR:
dpp04121
]
DICPUDRAFT_96440
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_96440
Enzymes [BR:
dpp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DICPUDRAFT_96440
Spliceosome [BR:
dpp03041
]
Complex B
Other components
Prp19 complex
DICPUDRAFT_96440
Complex C
Prp19-CDC5 complex
DICPUDRAFT_96440
Ubiquitin system [BR:
dpp04121
]
Ubiquitin ligases (E3)
U-box type E3
DICPUDRAFT_96440
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
DICPUDRAFT_96440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_SCAP
WD40_RFWD3
B-prop_COPA_B_2nd
WD40_like
Beta-prop_Vps41
zf-Nse
CENP-H
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
10509579
NCBI-ProteinID:
XP_003283650
JGI:
Dicpu1_96440
UniProt:
F0Z8B0
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MICSISGSTPEEPVISIKTGNVYEKRLIEKYIDTNGKEPTTGEPLSLQDLVAIKVGKTVK
PRPATATSIPSMLQLFQNEWDALMLETYTLKQQHESIRLELAHSMYQYDAACRVIARLVK
ERDAARAALANVHNIIPQANQQSAASTTSSTTNPAADIEMSNEDSLDSSVLEKITEAAAE
LIKARKERTTTNFPSQEEIKQFKSVEAQTKGIISSVAINTENDDVLALGSKDCNIYVYHR
STGETVASLKGHSGPINKVLFAPHNTIVSCSEDATIRVAKAGENPIRKNYSQYKNVSCFS
DHKASATDISLHPVGNYVFSSSLDKSINMYDIEQGKLLTTFGSSFGVGYTSVASHPDGMF
IASGTQNGILKTFDIKSKINNFNFQGFQGSIKYISFSENGYYVSVADDHVVKLYDLRKAG
NTPSPDIQTISIADQTIKSIDFDYSSQYLGIATNSHLNMYSVKNKQKPPIQEITNFNLDC
LDFKWSRPTSNLFVTSSISKNLINIYSL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatatgttcaatttcaggttctacaccagaagaaccagtaatttcaattaaaactggt
aatgtttatgaaaaaagattgatagagaaatatatagatactaatggtaaagagccaact
accggtgaaccattaagtctacaagatttagttgctattaaagttggtaaaactgttaaa
ccaagaccagctactgctaccagtatcccaagtatgttacaattatttcaaaatgaatgg
gatgctttaatgttagaaacctacacattgaaacaacaacacgaaagtattagattagaa
ttagcccattcaatgtaccaatatgatgctgcttgcagagtaattgctagattagtaaaa
gaaagagatgctgccagagctgctttagctaatgtacacaatataataccacaagctaac
caacaatccgctgcctcgactacttcatctaccacaaatcctgccgctgatatagagatg
tccaacgaggattcattagattctagtgtcctcgaaaagatcactgaggcagcagccgag
ttaattaaagccagaaaagaaagaaccactaccaatttcccatctcaggaagaaattaaa
caatttaaatctgttgaagctcaaaccaaaggtattatttcaagtgttgctatcaatacc
gagaacgatgatgtcttggctcttggttctaaagattgtaacatttatgtttatcaccgt
tcaactggagaaactgttgcatcactcaaaggtcacagtggtccaatcaataaagtttta
ttcgctccacataacaccattgtctcttgttcagaagatgccaccatcagagttgctaaa
gctggtgaaaacccaattagaaagaattattcacaatacaagaatgtatcatgcttttct
gaccacaaagcttctgctaccgatatttcacttcatccagttggcaattatgttttctca
tcatcactcgataaatcaatcaacatgtacgatatcgaacagggaaaattattaacaaca
tttggctcatcttttggtgttgggtacactagcgttgcttcacatccagatggcatgttt
attgcttcaggcacacaaaatggtattcttaaaacttttgatattaaatcaaaaatcaat
aatttcaacttccaaggtttccaaggttctatcaaatacattagtttctctgaaaatggt
tattatgtcagtgttgccgatgaccatgttgtcaagctttatgaccttagaaaagctggt
aatactccatcaccagatatccaaaccatcagcatcgctgatcaaaccattaaatccatt
gattttgattactccagccaatatcttggtattgctacaaatagtcatctcaatatgtac
agtgttaaaaacaaacaaaaaccaccaattcaagaaatcaccaatttcaatttggactgt
ttagattttaaatggtctagacccacttcaaatttatttgtcacttcatcaatttccaaa
aatttaattaatatttattcattataa
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