Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_96642
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Entry
DICPUDRAFT_96642 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03030
DNA replication
dpp03410
Base excision repair
dpp03420
Nucleotide excision repair
dpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DICPUDRAFT_96642
03410 Base excision repair
DICPUDRAFT_96642
03420 Nucleotide excision repair
DICPUDRAFT_96642
03430 Mismatch repair
DICPUDRAFT_96642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpp03032
]
DICPUDRAFT_96642
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_96642
DNA replication proteins [BR:
dpp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DICPUDRAFT_96642
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DICPUDRAFT_96642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
RuvB_N
PTCB-BRCT
nSTAND3
BRCT_2
Gp44_lid
AAA_16
Motif
Other DBs
NCBI-GeneID:
10510195
NCBI-ProteinID:
XP_003284290
JGI:
Dicpu1_96642
UniProt:
F0ZA62
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MAKKSSSPTESSSPKQKSKSSNSSKSKKTAAAAGSADIRSFFTAAPPPKKLSFSDEEEEK
PQATTLKPSDSKKDNNKENKDNNISKNNDSNDNNSNNNKSNRLSKLKKLKKETDSSSSED
NDDDYFSFSEEEPSNKKNNNRSKNSTSDKLNNNNDTDTKTKSIVNEKTTPAKSSSTPIKS
KKPVSKKIDLTTDEETESSENEKKKRKSSNKSSSSSSNKSSNLKRKEKPESSSEDEKQEE
KKRKIKTPEKATTQPQTPTKSTPTKSTPTKSTTTTKTPEKKVEVSDSKQKTPEKKTRVLD
NGMEVDEVYLSIKPKKDDIFAENQVSAIPKRASAINKTPEKAPQVSKAPTPIKSPSKAAP
KDEEMLDTEEASDTNKNVSSLTTSKSPAKKNKFNDDDIFGSPKQTENQKATTSATTTATK
KSDKFNDDDIFGDSPAKNKQSATPIKKTPTKTAKKEKFDDDDIFNSPPESKQKPKSKTNS
KFNEDSIFDDEETDSEEMKVDKPAPLSKKLKKAKEEEYADDNTESEETESEEEQDKKFKS
KSSSTPSKSASSVPSKPTSAPSKPTPTPGAKSAKQMAFLNFKFGTREPPPNKGKKPLPVG
KQNCLARYTFFISGVLDSLERDEAENLIKKYGGNVAKSAVKKLTHMIVGTGAGEQKLEKA
KKIRGVVFIDEDGLFEMISKTAPQPIKEETKEEQEEMVSTPPLSSSPPTTAAASKGIAKP
TLPIKPSLPLKPNTTATTTTTTSSASSFKPASGLQYAYTPPPQTISMSSIVVPPNISSIP
KGHDQLWVEKYKPKDLKDLIGNGSVFEQLSLFLSQWNQKQPKDPNKRNAVLLSGPPGIGK
TSAAILLCKLKGFEPIELNASDTRSKSEIERVLKGASDNQNISNFFSAQPTEKKKINAII
LDEIDGSSGNSDRGGIAEIIQLIKKSKVPFICICNDYYSNKIKSLKNYCMDLRLKRPTAA
QVTTRILQIAKHEDMKVTNYMVEKIFVSTHSDIRQTINTLQMLARSKKSYDNFTIEKAIE
SKDFDITPFSAVELLFKTSNGDINTQLEYFFSDFSLVPLLVQENYLSITPYGTDRNNLPI
EKYSDAADAICDSDEIGRAVGKEMAWQLLPSYGVASSILPAGYVRGTPNVMPLRFPTYLG
KYSNASKQQRFVKDLQLHMRSTSNTFSNRDETRLYYVPMLKHYLIEPLVVDGKEGIDKVI
NIMDEYGLTQDDRDRIIELSTWDKADILSGISAQLKTSFTKKFKAGSHAVYDHSLLTVTK
GSGDVNIAEGYEEVEGEESKQLLDDEKDDNEDEDITKSKLIKKSSTSSNTKSKPKAKSTT
TTTTTKSSKSKSKK
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaatcaagttcacctacagagtcatcttccccaaaacaaaaatcaaaaagt
agcaatagttcaaaaagtaaaaaaaccgctgctgctgctggtagtgctgatattagatca
ttttttacagctgctccacctccaaaaaaactttcatttagcgatgaagaagaagaaaaa
ccacaagctactactttaaagccttcagactctaaaaaagataataacaaagaaaataaa
gataataatataagtaaaaataatgatagtaacgataataatagtaataataataaaagt
aatagattatcaaaattaaagaaattaaaaaaagaaacagatagctcaagctcagaagat
aatgatgatgattattttagttttagcgaggaagaaccctcaaataaaaaaaataataac
agaagtaaaaactcaacatctgacaaattaaataataacaatgatactgatactaaaact
aaatcgattgttaatgaaaaaacaacacccgctaaatcatcttcaacaccaataaaatct
aaaaaaccagtttcaaaaaaaattgatttaacaactgatgaagaaaccgagtcatcagaa
aatgaaaaaaagaaaagaaaatcatcaaataaatcatcatcatcatcatcaaataaatca
tcaaatttaaaaagaaaagaaaaaccagaatcatcatctgaagatgaaaaacaagaagaa
aagaaaaggaaaattaaaactccagaaaaagctacaactcagccacaaacaccaacaaag
tcaacaccaacaaagtcaacaccaacaaagtcaacaacaacaacaaaaacaccagagaaa
aaggttgaggtttctgatagtaaacaaaaaacacctgaaaagaaaacaagagttttagat
aatggtatggaggtcgatgaagtttatttatcaattaaaccaaaaaaagatgatatcttt
gcagaaaatcaagtttcagctattccaaaaagagcatcagcaataaataaaaccccagaa
aaagcaccacaagtttcaaaggcaccaactccaattaaatctccatccaaggccgctcca
aaagatgaagaaatgcttgatacagaagaagcatcagatacaaataaaaatgttagttca
ttaacaacaagtaaatcaccagctaaaaaaaataaatttaatgatgatgatatatttggc
tcaccaaagcaaactgaaaatcaaaaagccacaacatcagcaacaacaactgcaacaaaa
aaatcagataaatttaatgatgacgacatttttggagactcacctgcaaaaaataaacaa
tcagctacaccaattaaaaaaactccaacaaaaactgcaaagaaagaaaaatttgatgac
gatgatatttttaattcaccaccagaatccaaacaaaaaccaaaatcaaaaactaatagt
aaatttaatgaagattcaatttttgatgatgaagaaacagatagtgaagaaatgaaggtt
gataagccagcaccgttatctaaaaaacttaaaaaagccaaagaggaagagtatgcagat
gataataccgaaagtgaagaaactgaaagtgaagaggaacaagacaagaaattcaaaagt
aaatcatcatccacaccatctaaatcagcatcatctgtaccatctaagccaacatctgcc
ccatctaaaccaacacctacaccaggagctaaaagtgcaaaacaaatggcttttcttaac
ttcaaatttggaacaagagaaccaccaccaaacaaaggtaaaaaaccattaccagtcggt
aaacagaattgtttagcaagatatacattctttataagtggcgttttggacagtttagaa
agagacgaagctgaaaatttaattaaaaagtatggtggtaatgtagctaaatctgcagtt
aaaaaacttacacatatgattgttggtactggtgcgggcgaacagaagcttgaaaaggct
aaaaaaattcgtggggttgtttttatagatgaagatggtttatttgaaatgatttcaaaa
actgcaccacaaccaataaaagaagagacaaaagaagaacaagaagaaatggtatcaact
ccaccactttcttcatctcctccaacaacagcagcagcttcaaaaggtattgcaaaacca
acactacccattaaaccatcattacctcttaaaccaaatacaaccgccaccacaaccaca
accacttcatcagcctcatcatttaaaccagcttcaggactccaatatgcatatacacca
ccaccacaaaccatttcaatgtcatcaattgtagttccacctaatatctcttcaattcca
aaaggtcatgaccaattgtgggtagaaaaatataaaccaaaagatttgaaagatttaatt
ggtaatggatcagtatttgaacaattatctttatttttatcacaatggaatcaaaagcaa
cctaaagatccaaataagagaaatgctgtattattatcaggtccaccaggtattggtaaa
acatcagcagccattttactttgcaaattgaaaggatttgaaccaatcgaactcaatgca
agtgatactagaagcaaatctgaaattgaaagagtattaaaaggtgcatcagataatcaa
aacattagtaatttctttagtgcccagccaacagaaaaaaaaaagatcaacgcaattatt
ttagacgagattgatggttcttctggtaatagcgatcgtggtggtatagctgaaattatt
caattgattaaaaaatcaaaagtcccattcatttgtatttgtaacgattattacagtaac
aaaatcaagtcattaaagaactactgtatggatttacgtttaaagagaccaactgctgcc
caagtaacaacacgtattttacaaatcgctaaacatgaagatatgaaagtaacaaactat
atggtcgaaaagattttcgtctctacccattcagatattagacaaactataaacactctt
caaatgttagcaagatcaaagaaaagctatgataactttaccatcgaaaaagcaattgaa
tctaaagattttgatatcactccatttagtgcagtcgagcttttattcaaaacatctaat
ggtgacattaacacccaattagaatatttcttttcagatttctctttggtaccattattg
gttcaagagaattatcttagtataacaccatatggaacagatagaaataatcttccaatt
gaaaagtattctgatgctgccgatgcaatttgcgattctgatgaaattggtagagctgtt
ggtaaggagatggcatggcaattattaccatcctatggtgtagcatcatctattcttcca
gcaggttatgtacgtggtaccccaaatgtaatgccacttcgtttcccaacttatttagga
aaatatagcaatgcatcaaaacaacaacgtttcgttaaagatttacaattacatatgcgt
tcaactagtaacacattttcaaatcgtgacgaaactcgtctttactatgtaccaatgtta
aaacactatctcattgaaccattggttgtagatggtaaagaaggtattgataaagtaatc
aacataatggatgaatacggcttaactcaagatgatagagacagaattatagagctttca
acatgggataaagcagacatactttctggtatttctgcacaacttaaaacttcatttaca
aagaaatttaaagctggatctcatgcagtatatgaccactcactattgactgtaacaaaa
ggttctggcgatgttaatattgctgagggctatgaagaggttgaaggtgaagaatcaaaa
caattacttgatgatgaaaaagatgataatgaagatgaagatattacaaaatcaaaatta
attaaaaaatcatcaacatcatcaaataccaaatcaaaaccaaaagcaaaatcaactaca
acaacaacaacaacaaagtcatccaaatcaaaatctaaaaaataa
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integrated database retrieval system
