Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_96691
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Entry
DICPUDRAFT_96691 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DICPUDRAFT_96691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_96691
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
DICPUDRAFT_96691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
10506083
NCBI-ProteinID:
XP_003284406
JGI:
Dicpu1_96691
UniProt:
F0ZAJ1
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MSENNEDTNVDENVENNEDEENEDNNIEQLDGEEGGDGEDNGEEGDGEDDDDDDDDSDDD
DDDVVLVLDQESVEASSSKPGSSTGFNRTPNKTFAGFRPSSITPGSGGKFSTKQTPAGAF
VPAKTNQKTIYEVDIDSFEEKPWLKPGADISDYFNYNFTEDTWKAYCERQNQMRLEVNNL
GKIKGYESKNNIDSKSNGAIDLPPELQGDHEASHTNKKMQGGRPIFKKQPSRSDINNNSN
NNNGEGNDNTDSAPQDRYNRGQQNQMQQHLYQQHQQQQQQQLQQQQQTQGYNQRGAYNQD
NSGGYRGGINKPYEEEDSNRKRRSNEREREREREKERDDHRSSERERDREREREKSSRSD
SRSNSDRDRERDKDRDDYKSGRGTTGSGGNSRGGDRERDRDRDDYKGSGRSDRDRGDSRS
SSSYSSDYKRKGSAQQDSDRSKRRR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaataatgaagacacgaatgtagacgaaaatgttgaaaacaacgaggacgaa
gaaaatgaagataataatatagaacaattagatggtgaagaaggtggagatggagaagac
aatggtgaggaaggcgatggtgaagacgatgatgacgatgacgatgattcagatgatgac
gatgacgatgttgtacttgtattagatcaagagagtgttgaagcttcatcgagtaaacca
ggtagtagtactggttttaatagaacacctaataaaacatttgctggatttagaccatct
tcaattactccaggttcaggtgggaaattttcaacaaaacaaacaccagctggtgcattt
gttccagcaaaaacaaatcaaaaaacaatttatgaagttgatatagattcattcgaagag
aaaccatggttaaaacctggtgcagatatttcagattatttcaattataattttactgaa
gatacatggaaagcatactgtgaaagacagaatcaaatgagattagaagtaaacaattta
ggtaaaattaaaggttatgaaagtaaaaacaatatagattcaaaatcaaatggtgcaatt
gatttacctcccgaactccaaggtgatcatgaagcatcccatacaaataaaaaaatgcaa
ggcggtagaccaatatttaaaaaacaaccaagtagatcagatattaataataacagtaat
aacaataatggtgagggtaatgataatacagactcagcaccacaagacagatacaacaga
ggacaacaaaaccaaatgcagcaacatttataccaacaacaccaacaacagcaacaacaa
cagctacagcaacaacaacaaacacaaggctacaaccaaagaggtgcatataatcaagat
aatagtggtggatatcgtggcggtataaataagccctacgaagaagaagatagtaacaga
aaaagaagaagcaatgagcgtgaaagagaaagagagcgtgaaaaagaaagagatgaccac
agaagcagcgaacgtgaaagagaccgtgaaagagaaagagaaaaaagctcaagatcagac
tctagaagtaatagcgacagagaccgtgaaagagataaagatcgtgacgattataaaagc
ggtagaggcacaaccggcagcggtggcaacagcagaggaggtgatcgtgaaagagataga
gaccgtgacgattataaaggtagtggaagaagcgaccgtgaccgtggagactcaagatca
tcgtcgtcgtactcatcagattataaaagaaaaggatcggcacaacaagatagtgataga
tcaaaaagaagaagataa
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