Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_97283
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Entry
DICPUDRAFT_97283 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_97283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_97283
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_97283
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
DICPUDRAFT_97283
Spliceosome [BR:
dpp03041
]
Complex B
Other components
Prp19-related factors
DICPUDRAFT_97283
Complex C
DICPUDRAFT_97283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Ribosomal_L14e
TPR_14
Suf
Mad3_BUB1_I
TPR_15
TPR_12
TPR_2
TPR_8
ARM_TT21
ARM_TT21_4th
TPR_1
KOW
TcaA_2nd
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
10499999
NCBI-ProteinID:
XP_003286105
JGI:
Dicpu1_97283
UniProt:
F0ZFD2
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MFVSKFTLFVEIGRVVIINYGQHINKTAIILDVLDQNRALVAGPHNGVERHIINLKWINL
TPLKVNIQRGARINTLNAAIKAADLQNKVAALTVVKKTVAKATKLNQTDFERFKSALARR
QLNRKVSGEVKKLVNIANRAAHKKAVAQKAADQIIIIMPLINDMKNLNVVDEEFIVKPSI
DDIPYEEDVSKNPLSVNSWLRYLESKQASPQKERNYIYERAIRELPRSYKIWHQYLRERT
LAVRGKCILDSSYESVNNLYERSLVFLDKMPRIWLEYCEFLIGQEKITKTRKTFDRALIA
LPITQHYRIWNLYTKFISKKTVPPLTCIRVYKRYLKVQPEKVEEYIDYLIKISEWQEVVN
QLIKVLDDHKFKSIKGKTKHDIWLQLCDILSSHPKDIKGIKVDAIIRSGINKFTDQVGKL
WSSLAEYYIQLAQFEKARDVFEEALNSVSTARDFSFVWESYTQFEDSLLTAKQELLEDDP
SDDNILEFDMMVERYESLINRQPLLLNSVLLKQNPNNVMEWQKRVKLYTEPVFNAKMIVE
TYSDAIKTIDPQNVKGKLSNIYSSFAHFYESNNKISQARLIFESSLKVNFKTVDDLSSLY
CDYAEMELRLKNFEKALDILKRGTVSPKKQYTITENEPVQKKLYKSIKLWSFYVDLEESF
GTFHSTKSIYEKMIQLKVVSPQIILNFTRYLEDNKYFEDMFKAFEQGISLFPFPHVHDIW
ISYLTKFIKRYGGMKLERTRDLFEQVLSKVPAKESIIFYLMYANFEEQYGLARHSMAVYD
RASRSVAPEDKYKMYLLYIHRASEFFGVNQTREVFTKAIENLPDEFARDMCLKFADMERK
YGEIDRARSIYIHGSEFSDPRTSLTFWTTWSEFEKAHGNEETFKEMLRIRRSVQNKALLI
SPTQLLLNKLNNKEQIGDTKSQANKPVQHPIAANQTQSQPQPQPQPQPQPSQPIQYNKII
KNDDEINLDDEEEEEEEETINIEQKSIPKTLFENNIK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttcaaagttcaccctcttcgtcgaaattggcagagttgtcatcatcaactat
ggtcaacacatcaacaaaacagccatcatccttgatgtcttagatcaaaacagagcttta
gttgctggtccacacaatggtgtcgaacgtcacatcatcaacttaaaatggatcaactta
actccattaaaagttaacatccaaagaggtgccagaattaacactttaaatgccgccatc
aaagctgctgatctccaaaacaaagttgctgccctcactgttgtcaaaaaaactgttgcc
aaagccaccaaactcaaccaaactgactttgaacgtttcaaatctgccctcgccagacgt
caactcaacagaaaagtttcaggtgaagttaagaaattagtcaacattgccaacagagcc
gcccacaaaaaagctgttgcccaaaaagctgccgaccaaattattattatcatgccatta
attaatgatatgaagaatttaaatgttgttgatgaggaatttatagttaaaccaagcatt
gacgatataccttatgaagaggatgtatcaaaaaatccattatcagtaaatagttggtta
agatatttagaatcaaaacaagcatcaccacaaaaagaaagaaattatatttatgaaaga
gcaattagagaattacctagaagttacaagatatggcatcaatatttacgtgaaagaact
ttggctgttagaggaaaatgtattttagatagctcatatgaatccgtaaataatttatat
gaaagatcattagtatttttagataagatgccaagaatttggttagaatattgcgaattt
ttaattggtcaagaaaaaattacaaaaactagaaaaacatttgacagagcattaatagca
ttaccaattacccaacattatagaatttggaatttatacactaaatttatatcaaaaaaa
acagtaccaccattaacatgtattagagtttataaacgttatttaaaggtccaaccagaa
aaagttgaagagtatatagattatttaataaagatttcagaatggcaagaggttgtaaat
caattaatcaaggtattggatgatcacaaatttaaatcaattaaaggtaaaaccaagcat
gatatttggttacaactttgtgacatactttcatcacatccaaaagatattaagggtatt
aaagtcgatgctatcattagaagcggtatcaataagttcactgatcaagttggtaaatta
tggtcatcattagcagagtattacattcaattggcacagtttgaaaaggcaagagatgtt
tttgaggaggcattaaattcagttagtacagcccgtgactttagttttgtttgggaatca
tatactcagtttgaagattcattattaacagcaaagcaggaattattagaagacgatcca
agtgatgataatattttagaatttgatatgatggtcgagcgttacgaatctttaatcaat
cgtcaacctttattactcaatagtgtcttattaaaacaaaacccaaataatgttatggag
tggcaaaaaagagttaagctttatacagaaccagtattcaatgctaaaatgattgtcgaa
acttatagtgatgctattaaaacaatcgatccacaaaatgtcaaaggaaaattatcaaat
atctattcatcatttgctcatttctatgaatcaaataataaaatatctcaagctcgttta
atttttgaaagttcattaaaggtcaattttaaaactgttgacgacttatcttctttatac
tgtgactatgcagaaatggagttaagattaaagaatttcgaaaaagcactcgatatttta
aaaagaggaacagtttcaccaaaaaaacagtatactattacagaaaatgaaccagttcaa
aaaaaattatataaatcaattaaattatggagtttttatgtagatttagaggaatcattt
ggaactttccacagcacaaagtcaatatatgaaaagatgattcaattaaaagttgtttca
ccacaaatcattttaaatttcacaaggtatttggaggataacaaatatttcgaagatatg
tttaaagctttcgaacaaggtatatcactatttccattcccacacgttcatgatatttgg
atatcatacttaacaaaatttattaaaagatatggtggaatgaagttagagcgtacaaga
gaccttttcgaacaggttttatcaaaagtaccagccaaggagtcaattatattttattta
atgtatgcaaatttcgaagagcaatatggtttagctcgtcattcaatggccgtttatgat
cgtgcatcaagatcagttgccccagaagataaatacaaaatgtatctcttatatattcat
cgtgcttcagagttctttggtgtcaatcaaactagagaggtatttaccaaagctattgaa
aatttaccagatgagtttgctcgtgacatgtgtcttaaatttgccgatatggaaagaaag
tatggtgaaatagatcgtgctcgttcaatttatattcatggttcagaattttcagatcca
agaacctcacttaccttttggacaacttggagtgagtttgaaaaggctcacggtaatgaa
gaaacatttaaagaaatgcttagaattcgtcgttcagttcaaaataaagctcttttaatt
tctccaacacaattattattaaataaactaaataataaagaacaaataggcgatactaaa
tctcaagcaaataaaccagtacaacacccaatagcagcaaatcaaacacaatcacaacca
cagccacagccacaaccacagccacaaccatcacaacctattcaatataataaaataatt
aaaaacgatgatgaaataaatttagatgatgaagaagaagaggaggaagaggagactatt
aatatcgaacaaaaatcaattccaaaaactttatttgaaaataatataaaataa
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