Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_98882
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Entry
DICPUDRAFT_98882 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03013
Nucleocytoplasmic transport
dpp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DICPUDRAFT_98882
03015 mRNA surveillance pathway
DICPUDRAFT_98882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_98882
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
DICPUDRAFT_98882
mRNA cycle factors
P-body specific factors
DICPUDRAFT_98882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
10508963
NCBI-ProteinID:
XP_003291036
JGI:
Dicpu1_98882
UniProt:
F0ZUE2
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MSYVYVPKVNNNSVPQQMNQQPPQQQQPVGGVAQQQSNQQLPEQQQPPKEKRPPKPKVPR
VPKDLKDPNSDFNDNSNNNNNKPKTRPPKEPKDGKEVKDKPVRVKKEKPVVGDKLPQNNQ
PAQPGQPAQSQPQPQPQQPKQPKQPNQPNQPKQPNQPKPKPNDIQQNTRKEDYSKNKFGQ
YKYVAKEDKEKLEKEKIEKEQKEREDKLEKEKLEKEKKEREEKERLEREQKEKEQKEKEE
QEQLNKKRIQRLRDELSMQSNLRANNQKYAKSKQGTKDLDSNFKKVSTFVKKIKTITECR
EGIVNEVSQLNLSHYVSEIVPSLLKSNFKPQDTIYVVQVLSIMYQKYEDVDSLIQENIPP
FFTPFIIPLTDSESERNSKITKRRYILRLMLDLFCIDIIHSYQPVYKLITKLSSLAVEQD
KDQGYANLLTFLNFLKQFQQIFNYKDKVQDLKSTFLTLITEEEFNNTRNIITNYYQTLCN
FLNKEKSSLRDKEKEIKLFYRTKGEVPDEASSSYDQMRKQYEKLITNISNYAELIGEPVP
NNDYSFQLEEEINNEQKTEQLEVFDSPFENEEQKHFYEITFTVPGKDQHLHTPKASPLSP
TNQSTSSTPSLSSTPTLTSISSPETIENKENKEITSPTATKESPTTTTTTTTTDSAPNTP
SKNSKPTDDVEKEKQKIKGILEDLLRQLKNTHKPSSIDSIVQEFIKVPPKYTKPFLQQLL
QQSRLDHIPTFSRFLSTIYQSSTYKDYVNNYIKEIEDDQKGLFEKKEPNLLTFKIRNIVY
IGEFIKFGVLPRTTAFSYLRICFDDFTNHNIDIACYLFETCGRYLYRTADSQIRLRNMLD
ILIKYRNATTLGSSKEPMVESAYLACRPIVVKKKQIDPIKKFVKFLIFKHLSTATLDRIV
EKILQLPWPECEGYLTKYLLDVQKGKFGNIYLIADILFHLRDYYPTFVQSVIWKLYEEIT
VGFEKNDFNQNQKRIMQITLFGELYNACLLETNHVFDLLIGALEYGYTTTHLFPASLNRE
RELLRNRPKPNLDEFDPVNDCFRIRFICTLLLVCKDCFPPEDIEQNLKPYMVFFQRYTLT
KLLPLEIEFMISDCLQIIPDIKVFKTWEEANNDCLILSNGGTITNEPLNQQESPPQPQPQ
PQPQPQPQPQIKIQKPQKPQPQQQQQQQPQKTTSNTNQSSRSPSPSQPLSPTKSNTPLPS
ENIDQEKLIMSELGDLENEDDDINIEEDILKEFKAMVTEGQEKKEKQKLTLPSLFNITGG
PSALSDTSPITPIASNGFVPFKILLKKGDKSISKNIEIPQDSTFVQNILNAKEEQEKDIR
ENKKQVLKQLGNLN
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgtttatgtaccaaaggtaaataataattcagtaccacaacaaatgaaccaa
caaccaccacaacagcaacaacctgttggtggtgtagctcaacaacaatcaaaccaacaa
ctaccagaacaacaacaaccaccaaaagaaaaaagaccaccaaagccaaaagtaccaaga
gttccaaaggatttaaaggatccaaactccgattttaatgataatagcaataacaataat
aataaaccaaaaactagacccccaaaagaacctaaagatggtaaagaagtaaaggataaa
ccagttagagttaaaaaagaaaaaccagttgtaggtgataaattacctcaaaataatcaa
cctgcacaaccaggacaaccagcacaatcacaaccacaaccacaaccacaacagccaaaa
caaccaaaacaaccaaatcaaccaaatcaaccaaaacaaccaaatcaaccaaaaccaaaa
ccaaatgatattcaacaaaatactagaaaagaagattattcaaaaaataaatttggtcaa
tataaatatgtagccaaagaagataaagagaaattagaaaaagaaaaaattgaaaaggag
caaaaagagagggaagataaattagaaaaagaaaaattagaaaaagaaaagaaagaaaga
gaagagaaagaaagattagagagagaacaaaaagaaaaagaacagaaggagaaagaagag
caagagcaattgaacaagaaaagaattcaacgtctaagagatgaattatcaatgcaatca
aaccttagagccaataatcaaaagtatgccaagtctaagcaaggaactaaagatttagat
tccaatttcaaaaaggtatcgacatttgtcaaaaagattaaaaccattaccgaatgtcgt
gaaggtatagtcaatgaagtttcacaattgaatttatctcattacgtttctgaaatcgta
ccatccctattaaagtcaaactttaaacctcaagataccatttatgtagtccaagtatta
tctatcatgtatcaaaagtatgaagatgtagattccttaattcaagaaaacattccacca
ttctttactccattcatcattcctttgacagattctgaaagtgaaagaaattctaaaatc
accaaacgtagatatattcttcgtttaatgttagatttattctgtattgatatcattcac
tcatatcaaccagtttataaattaattacaaaactttcatctcttgccgttgaacaagat
aaagatcaaggttatgcaaatttattaacttttttgaatttcttaaaacaattccaacaa
attttcaattataaagataaggttcaagatttaaaaagtacatttttaacattaatcaca
gaagaagaatttaacaacactagaaatataattacaaattattatcaaacattgtgtaac
tttttaaataaagaaaaatcttccttaagagataaagaaaaagaaattaaattattttat
agaactaaaggtgaagtaccagatgaagcttcaagtagctatgatcaaatgagaaagcaa
tatgaaaaattaattacaaatatttcaaattatgcagaattaattggtgaaccagtacca
aataatgattattcattccaacttgaagaagagattaataatgaacaaaaaactgaacaa
ctcgaagttttcgattcaccattcgaaaatgaagaacaaaaacatttttatgaaattact
tttaccgtaccaggcaaagatcaacatttacatacacctaaagcttcaccattatcccca
actaaccaatcaacctcatctactccatcattatcatcaactccaactttaacttctatt
agtagcccagaaactattgaaaataaagaaaataaggaaattacaagtcctactgctaca
aaagagtccccaaccaccaccaccaccaccacaacaacagactctgcaccaaatacacca
tccaaaaattcaaaaccaacagatgatgtagaaaaagaaaaacaaaaaattaaaggcatt
ttagaagatttattaagacaattaaaaaacacacataagccatcatctatagattcaatt
gttcaagagtttattaaagtaccaccaaaatataccaaaccattcctccaacaattatta
caacaatcaagattagatcatataccaacattttccagattcctttcaacaatttaccaa
tcatcaacttataaagattacgtcaataactatatcaaagagattgaagacgatcaaaaa
ggtttgtttgaaaagaaagaaccaaatcttctcacatttaaaattagaaatatcgtatat
ataggtgaatttatcaagtttggtgtactcccaagaacaaccgctttctcttatttacgt
atttgtttcgatgatttcaccaatcacaatatagatatcgcttgctatctttttgaaact
tgtggtagatatctttatagaaccgccgactcacaaattcgtttaagaaatatgttggat
attttaatcaagtatagaaatgcaactacattgggtagctcaaaagaaccaatggttgaa
agtgcctatttagcttgtagaccaattgtagtcaaaaagaaacagatagatccaataaag
aaatttgttaaattcttaatattcaaacatctttctaccgccactttagatagaatcgtt
gaaaagatattgcaactaccatggcctgaatgcgaaggttaccttactaaatacctctta
gatgtccagaagggcaaatttggcaatatctatttgattgctgatattctcttccatctt
agagactactatcccacatttgtacaatctgtaatttggaaattatacgaagaaataaca
gtaggctttgaaaaaaatgactttaatcaaaaccaaaagagaattatgcaaataacatta
tttggtgaactctacaatgcatgtcttttagaaaccaaccatgttttcgatttattaatt
ggtgctttagaatacggttatactacaacccatttgttcccagccagtctcaatagagaa
agagaactattaagaaacagacccaaaccaaacttggatgaattcgatcctgttaatgac
tgttttagaattcgttttatatgtacattgctattagtctgtaaagattgcttcccacca
gaagacatcgagcaaaatcttaaaccctacatggtattcttccaacgttataccctaaca
aaactattaccattagaaattgaatttatgatttcagattgtcttcaaattattccagat
ataaaagtatttaaaacatgggaagaggcaaacaatgattgtttaattttatcaaatggt
ggcacaataactaatgaaccattaaatcaacaggaatcaccaccacaaccacaaccacaa
ccccaaccacaaccacaaccacagccacaaattaaaatacaaaaacctcaaaaaccacaa
cctcaacagcaacaacaacaacaacctcaaaaaacaacctcaaacacaaatcaatcatca
agatcaccatcaccatcacagccattgtcaccaacaaaatcaaataccccattaccttca
gaaaatatagatcaagagaagcttattatgagtgaattaggagatttagaaaatgaagat
gatgacatcaatatagaagaggacattttgaaggaatttaaagcaatggttacagaaggt
caagaaaagaaagaaaaacaaaaattaacattaccttcattatttaatataactggtggt
cccagtgctcttagtgatacatcaccaattacaccaatagcttcaaacggtttcgttcca
ttcaaaatattattgaaaaaaggggataaatcaatatctaaaaatattgaaatccctcaa
gattcaacctttgtccaaaatattttaaatgcaaaagaagaacaagaaaaagatattaga
gaaaataaaaaacaagttttaaaacaattaggtaatttaaattaa
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integrated database retrieval system
