Desulfobulbus propionicus: Despr_0365
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Entry
Despr_0365 CDS
T01413
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dpr
Desulfobulbus propionicus
Pathway
dpr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Despr_0365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpr03400
]
Despr_0365
Enzymes [BR:
dpr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Despr_0365
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Despr_0365
DNA repair and recombination proteins [BR:
dpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Despr_0365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
RNHCP
Zn_ribbon_IS1595
Zn_ribbon_6
Ribosomal_S13
DUF7351
Motif
Other DBs
NCBI-ProteinID:
ADW16547
UniProt:
A0A7U3YJH9
LinkDB
All DBs
Position
complement(374728..375567)
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AA seq
279 aa
AA seq
DB search
MPELPEVEVTRRGLLAPLSGRTVVRVSWSAHRLRGPIPRKLLQEHIAAQQIRTIDRRAKY
LLLRMVNGAVLVIHLGMTGKLGLIQGQTTLHKHDHLVLHLDNGLDVRFNDSRRFGSIVVW
PPDHAAQLEADFSRKEGLEPFGPAFIADNLLALARGRRVAVKSLLMNSRLIAGIGNIYAN
EILFAARIAPQQPAHLLTEKEWGRIIQESRRILQLAIDAGGSSISDFLGVSGHPGYFQLQ
LAVYGRKDAPCPRCGQAILKTIQGGRATYHCPGCQPHVE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccggaagtggaggtaacccggagaggcttgctggcccccttgtctggc
agaaccgtggtcagggtctcgtggagcgcccaccgattgcgcggcccaatcccccgcaag
ctcctacaggaacacattgccgcccaacagatccggaccatcgatcgacgcgccaaatac
ctgctgttgcgaatggtcaacggcgcggtgctggtgatacatctgggcatgaccggcaag
ctcggcctgatccaggggcaaacgacgctccataaacacgatcacctggtgttgcacctg
gacaatggcttggatgtccgcttcaacgacagccgccgattcggctcgatcgtggtttgg
ccgccggaccacgccgcgcaattggaggcggatttttcccgcaaggagggcctcgaaccc
ttcggaccagctttcatcgccgacaacctgctcgccctggctcgcggcaggcgggtcgcc
gtgaagtctttgctgatgaacagccgtctcattgccggtatcggcaacatctatgccaat
gaaattctcttcgccgcccggattgcaccgcagcaaccagcacatctcctgaccgagaag
gaatgggggcgaatcattcaggagagccgccgcatactgcaactggccattgatgccggc
ggttcctccatctccgattttctcggcgtcagcggtcatcccggatattttcaactgcag
ctcgcggtgtatggccgcaaagacgccccctgcccccgctgcggccaagccatcctcaaa
accattcaaggtggcagggccacctaccactgtcccggctgccaaccccacgtcgagtga
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