Desulfobulbus propionicus: Despr_0994
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Entry
Despr_0994 CDS
T01413
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dpr
Desulfobulbus propionicus
Pathway
dpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Despr_0994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpr03019
]
Despr_0994
Enzymes [BR:
dpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Despr_0994
Messenger RNA biogenesis [BR:
dpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Despr_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
Flavi_DEAD
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ADW17168
UniProt:
A0A7U3YKW7
LinkDB
All DBs
Position
1120925..1122211
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AA seq
428 aa
AA seq
DB search
MSFTDFHFNEHITHAISHCGFTAPTPIQQQAIPSVLERRDLLGLAQTGTGKTAAFILPTV
QHLMRTQAHHVRALIIAPTRELAEQINDFTRAIIRNTRLKSIAVYGGVSKQAQITKLRGG
VDIVVACPGRLLDLLNDKAVDLSRVDTLILDEADHMFDKGFLPDIRRILRRLPAERQSLV
FSATMPDEIRHLAEDILTDPVTVQINPTRSVQSISHRLYAVEQEQKTDLLLQLLKDEAMA
TTLIFTRTKHKAKNLAQKLAQSGFKATSLQGNLSQNRRQQALDGFKTGAFTILVATDIAA
RGIDVNGISHVINYDMPDTAEAYIHRTGRTGRAARTGEALTFATREDSRMIRLIERSIDG
RMNHGDVAELPAVRSAVPSVRSHAGKPAGKKISVTKSRPEAKGESAPKASPRKRSTASSV
FGLSGRSK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaccgattttcatttcaacgaacacattacccacgccatttcgcactgcggt
ttcaccgcgccaacccccattcagcaacaggctattccttcggttcttgaacgtcgtgat
cttcttggcctggcccagacaggcaccggcaagaccgctgcctttattttgccgaccgtg
cagcatctcatgcggacccaggcccatcatgtccgggctctgatcattgccccgaccagg
gagctggccgagcagatcaatgattttacccgggcgatcattcgcaacacccgtctaaaa
agtattgccgtgtacggcggggtcagcaagcaggcacagatcaccaagctgcgcggcggc
gtcgacatcgtggtcgcctgtccgggccgtttgctcgacctgctcaacgacaaggcggtg
gacctgagccgggtcgacaccttgattctggacgaggccgaccacatgttcgacaagggc
tttttgcccgatatccgccgcattttgcgccggttgcccgctgagcggcaatcgttggtt
ttttcggccaccatgcccgacgagattcggcatctggccgaggacatcctcaccgatccg
gtgaccgtgcagattaatccgacccgttcggtgcagtccatttcccatcggctctacgcg
gtcgagcaggagcaaaagaccgacctgctcctgcagctgctcaaggatgaggccatggcc
accaccctgattttcacccgcaccaagcacaaagccaagaatctggcccagaaattggct
caatcgggcttcaaggccacctcgctccagggcaacctgtcgcagaacagacgccagcag
gcgttggatggattcaagaccggtgcgttcaccatcctggtggccaccgacattgccgcc
cgtggtatcgatgtcaatggcatttcgcatgtgatcaactatgacatgcccgataccgcc
gaggcctatattcatcgaaccggccgcaccggcagggccgcccgcaccggcgaggccctg
acctttgccacccgcgaggacagccgcatgatccgcttgatcgaacggtccattgacggg
cggatgaatcatggggacgtggccgagctgcccgcggttcgctccgcagtgccttcggtc
cggtcccacgccggcaagcctgccggcaaaaaaatatccgtgaccaaatcgcgtccggag
gcaaagggggaatcagcccccaaggcttccccgcgcaagcggtccacggcatccagtgtt
ttcggcctttcgggccggtcaaaatga
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