Desulfobulbus propionicus: Despr_2405
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Entry
Despr_2405 CDS
T01413
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dpr
Desulfobulbus propionicus
Pathway
dpr03030
DNA replication
dpr03430
Mismatch repair
dpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Despr_2405
03430 Mismatch repair
Despr_2405
03440 Homologous recombination
Despr_2405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpr03032
]
Despr_2405
03400 DNA repair and recombination proteins [BR:
dpr03400
]
Despr_2405
Enzymes [BR:
dpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Despr_2405
DNA replication proteins [BR:
dpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Despr_2405
DNA repair and recombination proteins [BR:
dpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Despr_2405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
CcmE
Motif
Other DBs
NCBI-ProteinID:
ADW18546
UniProt:
A0A7U3YNC5
LinkDB
All DBs
Position
2763626..2767147
Genome browser
AA seq
1173 aa
AA seq
DB search
MPTPFIHLHVHSQYSMLDGAIRVSDLIDTAKEFGMEAVALTDHGAMYGALEFYEKAKKAG
IKPLVGCEFYLAENGMEIHDRSAGHNFHLVALAMNEAGYGNLMKLASLAQTKGFYYRPRI
DRQTLYAHQEGLIVLTACLKGEIPWRLTHNDENRARARALELQKVFGDRLYLEIQENGLP
EQTIANQGLMALAKDLNIKLVATNDCHYLTKEESYAHEVLLCIQTGKTINDPNRFRFNTN
ELYFKSGDEMAAQFAYCPEAISNTLEVAERCNLELSFKEHFFPIFPIKENETLETVFSQA
CWDGFQQRLDHMREMGPVSAETEKTYRDRLEYEIDVIQEMGFAGYFLIVADFINWAKKQK
IPVGPGRGSGAGSLAAYCMAITDIDPIPYGLLFERFLNVERVSMPDFDVDFCKERRDEVI
DYVRQRYGGDDYVAQIVAYGSMKARAVLRDVGRVLDIPLPVVDRIAKLVPEELKITLKKA
IEKEPRLREAMKDDEVRELLTIAQTLEGLARHKSTHAAGVVISPKPMVEYLPVCIGPNKE
ILTQYDMKYTEKTGLIKFDFLGLKTLTVIDRALKLIAYDVGKEVDLRKIPMDDPKTYNLL
CRGDSLGVFQLESDGMRELLIKMQPEQFTDLIALVALYRPGPLDSGMVDTFVETKHGRRP
ADYPLPQIKSVLQETYGVIVYQEQVMKISNILAGYSLGDADILRRAMGKKIPEVMEKERG
KFMAGAKVNNIPEDKATYIFDLMAKFAGYGFNKSHSAAYALVAYQTAYLKAHYPAQFLAA
LLSCDYDNTDKVVKYINECRQNKIEVLPPDINESFNDFTVINDRVRFGLAAVKNVGGAAL
DSILAEREAGGPYRSLSDFCSRVDSSKVNRKVIESLIKAGAFDSMSGRRAQYMAMLDQCL
DRAKAAQRDRMSGQMNLFAIGQPASKQAEATEVELPADVEEWPELERLAAEKETVGFFLT
GHPLEGVMEDLRRAVDTDIAGVEKLREGQAVRIGGLIASYKEHKSKKGDRMAFTTLEDMS
ASIEVIVFPSTFAECAELLTSEQPLVVLGTVQQGERGAKVVAQEVKTLTGALEHYTERAV
ITLRAAATSRQHMLELKELLYQHHGATPVMLTLHFDNRGEVDIQVLKDMSIRPSSDLFHK
ITRLCGPRSLAVQMRKPEVQPRRNGNGRGGNGH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcccacacccttcattcatcttcacgtccactcccagtactccatgctcgacggcgcc
atccgcgtctccgacctgatcgacaccgccaaggaattcggcatggaggcggtggccctc
accgaccacggcgccatgtacggggcgctggaattctatgaaaaggccaagaaagcgggc
atcaagcccctggtcggctgcgagttctacctggcggaaaacggcatggaaatccatgac
cgcagcgccggccacaacttccatctggtggcgctcgccatgaacgaggccggctacggc
aacctgatgaagctggcctccctggcgcagaccaaaggattctactaccggccgcggatc
gaccgccagactctgtatgcccatcaggaagggttgatcgtgctcaccgcctgcctcaag
ggcgagattccctggcggctgacccacaacgacgagaaccgtgcccgcgcccgcgctctg
gaactgcaaaaagtgttcggcgaccgcctctatctggagattcaggaaaacggtctgccc
gagcagaccatcgccaaccagggactgatggcgcttgccaaggacctgaatatcaagctg
gtggccaccaacgactgccactacctgaccaaggaggagtcctacgcccacgaggtgctg
ctgtgcatccagaccggcaagaccatcaacgaccccaaccgcttccgcttcaacaccaac
gaactctacttcaagtccggcgacgagatggccgcccagtttgcctactgccccgaggcg
atcagcaacaccctggaggtggccgagcggtgcaacctggaactgagtttcaaggaacac
tttttccccatctttccgatcaaggaaaacgagaccctggaaacggtcttctcccaggcc
tgttgggatggtttccagcagcggctcgaccacatgcgcgagatgggcccggtcagcgcc
gagaccgagaagacctaccgcgaccggctggaatacgagatcgatgttatccaggagatg
gggtttgccggctacttcctgatcgtggccgatttcatcaactgggccaagaaacagaaa
attccggtggggccgggccgcggctcgggcgcgggcagcctggccgcctactgcatggcg
atcaccgacatcgatcccattccctatggcctgctgttcgaacgctttctcaacgtcgag
cgggtgtccatgcccgactttgacgtcgacttctgcaaggagcggcgcgacgaggtcatc
gactacgtccgccagcgctacggcggcgacgattatgtggcccagatcgtggcctatgga
tcgatgaaggcccgggccgtgctgcgcgacgttggcagggtgctcgatatccccctgccg
gtggtggaccggatcgccaagctggtgccggaggaattgaaaatcaccctgaagaaggcg
atcgaaaaggagccccgactgcgcgaggcgatgaaggacgacgaggtccgcgaactgctg
accatcgcccagaccctggaggggctggcccggcacaagtcgacccatgccgccggggtg
gtcatctcgcccaaaccgatggtcgagtacctgccggtgtgcatcggccccaacaaggag
atcctgacccagtacgacatgaagtacaccgagaagaccggactgatcaagttcgacttc
ctcgggctgaagaccctgaccgtgatcgaccgggccctgaaactgatcgcctatgacgtg
ggcaaggaagttgacctgcgcaagattcccatggacgaccccaagacctacaatctgctc
tgccggggcgacagcctgggggtgttccagttggaaagcgacggcatgcgcgagctcttg
atcaagatgcagccggagcagttcaccgacctgatcgccctggtcgccctgtaccggccg
ggcccactcgactcgggtatggtcgatacctttgtcgagaccaaacacggccgccggccc
gccgactaccccctgccgcagatcaagtcggtcctccaggagacctacggcgtgatcgtc
taccaggagcaggtgatgaagatctccaatatcctggcgggctatagcctgggtgatgcc
gatattctccgccgcgccatgggcaagaagatccccgaggtcatggagaaggagcgcggc
aagttcatggccggggccaaggtcaacaacatccccgaggacaaggccacctacattttc
gacctgatggccaagtttgccggttacggcttcaacaaatcgcactcggcggcctacgcc
ctggtggcctatcagaccgcctatctcaaggcccactatccggctcaattcctggccgcc
ctgctctcctgcgactacgacaacaccgacaaggtggtcaagtacatcaacgagtgccgc
cagaacaagattgaggtcctgccgccggacatcaacgaatcgttcaacgatttcacggtg
atcaacgaccgtgttcgctttggcttggcagcggtcaagaacgtcggcggcgcggccctt
gattcgatcctggccgagcgggaagcgggcgggccataccggtccctgagcgatttctgc
agccgggtggacagctctaaggtcaatcgcaaggtgatcgagagcctgatcaaggccggg
gccttcgactcgatgagcggacgccgcgcccagtacatggccatgctcgaccagtgtctc
gaccgggccaaggcggcccagcgcgaccggatgagcggccagatgaatttgtttgccatc
gggcaaccagcgtcgaaacaggcggaggcaacggaggtcgaactgcccgccgatgtcgag
gagtggccggaactggaacggctggccgcggaaaaggaaacggtcggctttttcctcacc
ggtcatcccctggaaggggtgatggaggatctgcgccgggcggtggacactgacatcgcc
ggggtggaaaagctgcgcgaaggccaggcagtgcgtatcggcggcctgatcgccagttac
aaggagcacaaatcgaaaaaaggcgaccgcatggccttcactaccctggaggatatgagc
gccagcatcgaggtgatcgtctttccctcgacctttgccgaatgcgccgagctgctgacc
agcgagcagccgctggtggtgctgggcacggtgcagcagggggaacgaggcgccaaggtg
gtggcccaggaggtcaagaccctgaccggggcactggagcactataccgagcgagcggtg
atcactctgcgggcggcggcgacctcacgccagcacatgctggaactcaaagaactgctt
taccagcaccacggggccacgccggttatgctcaccctgcatttcgacaatcggggcgag
gtcgacattcaggtgctcaaggatatgagcatccgcccttcctccgacctctttcacaag
atcacccggctctgcggcccccgctcgctggcggtgcagatgcgcaaacccgaggtgcag
ccgcgccgcaacggcaacggccgcggaggcaacggccactag
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