Desulfobulbus propionicus: Despr_3200
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Entry
Despr_3200 CDS
T01413
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dpr
Desulfobulbus propionicus
Pathway
dpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Despr_3200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpr03019
]
Despr_3200
03009 Ribosome biogenesis [BR:
dpr03009
]
Despr_3200
Enzymes [BR:
dpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Despr_3200
Messenger RNA biogenesis [BR:
dpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Despr_3200
Ribosome biogenesis [BR:
dpr03009
]
Prokaryotic type
rRNA helicases
Despr_3200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
NAT10_TcmA_helicase
AAA_22
MatB
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADW19328
UniProt:
A0A7U3YQ24
LinkDB
All DBs
Position
3678069..3679727
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AA seq
552 aa
AA seq
DB search
MTTATFARFGLHPDLVQTVTELGFTDPTPIQQAAIPLLLEGRDLIGQAQTGTGKTAAFGL
PLLQRITPRQQGVQALVLAPTRELAIQVAEAIQRYGQQRGITVLAVYGGQAYQQQIRSLR
QGVEVIVGTPGRLLDLMNQGTLDLTTVRTVVLDEADEMLSMGFVEDIELILDRIPAERQT
MLFSATISKRVLGLSARYLRDPETVSITPKQLTGATIEQRYYLVNQQDKVAALTRLFEME
TIDSALIFTRTRIGTGELANQLTSRGFPAEALNGDLSQDARIQVLNRFRNGQVKVLVATD
VAARGLDIDDISHVFNFDLPDDPEVYVHRVGRTGRAGREGIAISLLTPKDRWILRRIEDY
ARYKLTRAELPTIQQIENHRQALLMEQLEVWIRRGRCRREREVVEMLLQTGHQAEDIAAA
ALKLARGEEKKRPIDPITPIKEEQFNPRERKNDRFPRRGGQAGTGPGGRRGHDRDRDMVP
LRLNVGRADGVGVNHVVASLAHYSGVAAVQLGKIRLEADHTLVDVPEPLVGRLLSKNGAY
RIGRRAVNLERA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgcaacctttgcccgctttggcctgcatcccgatttggtgcagaccgtaacc
gaactcggttttaccgatcccacccccattcaacaggccgccattccgctgctgctcgaa
ggccgcgacctgatcggccaggcccagaccggcaccggcaaaaccgctgcctttggcctc
ccgctgctgcaacggatcacaccccgccaacagggggtccaggccctggtcctggcgccc
acccgtgagttggccatccaggtggccgaggccatccagcgatacggccagcagcggggg
attaccgtgctggctgtgtatggcggccaggcctatcaacagcagatccgcagtctacgc
cagggcgtcgaggtgatcgtcggcacccccggccgtctgctcgacctcatgaatcagggc
acgctcgatctgaccacggtgcggaccgtggttcttgacgaggccgacgagatgctgagc
atgggttttgtcgaggatatcgaattgatcctcgaccgcattcccgccgaacgtcagacc
atgctcttttccgccaccatctccaagcgggtcctgggcctgtccgcccgctacctgcgc
gacccggaaacagtgtccatcacccccaagcagttgaccggcgccaccatcgaacagcgc
tattacctggtcaaccagcaggacaaggtggcggccctgacccgactgttcgaaatggag
accatcgatagcgccctgatcttcacccgcacccgaattggaaccggcgaattagccaac
caactgacttcacgaggtttcccagccgaagctctcaacggtgacctcagccaggatgcc
cgtatccaggtgttgaaccggtttcgcaacggccaggtcaaggtcctggtggccaccgac
gtggccgcacgcggtctggacatcgacgacatctcccacgtgttcaacttcgatctgccc
gacgaccccgaggtctatgtccaccgggtgggtcgtaccggtcgggctggccgggaaggg
atcgccatctccctcctcacccccaaggaccggtggattctccgccggatcgaggactat
gcccgctacaagctgacccgggccgaactgccgaccatccagcagatcgagaaccatcgc
caggccctgctgatggagcagttggaggtgtggattcgccggggccgttgccgccgggaa
cgggaagtggtggagatgctgctgcaaaccggccaccaggccgaggatatcgccgccgcc
gccctcaagctggcccggggcgaggaaaaaaaacggcccatcgatccgatcacgccgatc
aaggaagagcagttcaatccgcgtgagcgcaagaatgatcgcttcccacgtcgtggcggt
caggccgggacaggaccaggggggcgacggggacacgaccgcgacagggacatggtgccg
ctcaggctcaatgtcggccgggccgatggggttggcgtcaaccatgtggtggcctcgctg
gcccattattccggggtcgctgccgttcaattgggcaagatccggttggaagcggaccat
accttggtcgatgtgccggagccattggtcggtcgcctgctttcaaaaaacggtgcgtac
cggatcggccggcgcgcggtgaacctggagcgggcctga
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