Entry |
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Name |
(GenBank) probable ATP-dependent DNA helicase
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KO |
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Organism |
dps Desulfotalea psychrophila
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dps00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DP0406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dps03019]
DP0406
03400 DNA repair and recombination proteins [BR:dps03400]
DP0406
Enzymes [BR:dps01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DP0406
Messenger RNA biogenesis [BR:dps03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DP0406
DNA repair and recombination proteins [BR:dps03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DP0406
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
435764..437848
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AA seq |
694 aa
MRCKMKERAIGYLRNALNKPEANFRDGQWESIEQLLNNKRVLVVQRTGWGKSMVYFLATK
LLREQGAGPTLLISPLLSLMRNQVEAATRIGVRAKTINSTNNEEWDTVQTELEANQVDVL
LISPEKLGNDDFRQNILSTMADKVGLFVVDEAHCISDWGHDFRPKYRQIVRVLQALPSNI
PVLATTATANNRVVDDVKSQLGDDIELIRGSLVRQSLRLQNITMPSSAARLAWLAQTIPK
LPASGIVYTLTKRDADRVTEWLQLVNIDAKAYYNGVPNREDLEQQLFHNEVKVLVATVAL
GMGFDKPDLGFVIHFQRPSSVVHYYQQVGRAGRAVEEAYGILLSGTEDDQITDFFIRSAF
PPQKHISEVIRVLDESNDGLSSYSMEKVLNLRTKQIMNTIDYLAAESPAPVVKVGTKWNA
TATASTYRINQENIDAITAIRRQEQQQMHEYMQHTGCLMAFLQDALDDPAPQNCGKCQNC
APELRLDESYDNDLANKAGLFLRRSYQPVKAKKKWPPHNPLPTYNFSGMIRENLIASEGR
ALSLWRDAGWGELIYKGKYEDNHFSDVLVTACVEMLREWAPEEAPKWVTCIPSINHPDLV
PNFAKRLARALEIPFVDCVVKVQNNQQQKTMENSFQQARNLDGVFKVNLESRAYSPCLLI
DDMVDSGWTFTVAAALLRQVGCTAVYPLALALNS |
NT seq |
2085 nt +upstreamnt +downstreamnt
ttgaggtgcaaaatgaaagaaagagcaatagggtacctgcgaaatgcccttaataaacca
gaagcaaattttcgtgatgggcaatgggaaagtattgagcagttgctgaataacaaacgg
gttttagtcgttcagcgaacaggttggggaaaaagcatggtatactttcttgcaactaag
cttttgcgtgagcagggggctggtccgaccctattgatatcaccacttttatcgctaatg
cgtaaccaagttgaggcggctacacgaattggtgttagagcaaaaacaattaacagtacc
aataatgaggaatgggacaccgttcaaacagaactggaagccaatcaagttgatgtactg
cttatctcacctgagaagttaggtaatgatgattttcgacagaatatcttatcaactatg
gctgataaggtaggattgtttgttgtggatgaggcacattgtatttctgattgggggcat
gatttcagacccaagtacagacaaattgtacgggtgctccaagctttaccatcaaatatc
cctgttcttgcaacaacagcgactgctaataatagggttgtagatgacgttaaatcgcaa
ttgggtgatgacattgaactcataagaggttcacttgttcgtcaaagccttagacttcag
aatataacaatgccaagctctgctgcgagattggcttggcttgcccagaccattcctaaa
cttcctgctagcggcatcgtctacactttgacaaaaagggatgctgatagagtcactgag
tggcttcaactagttaatatagatgctaaagcttactacaatggtgttcctaacagagag
gatcttgaacaacagttatttcataatgaagtaaaagtactggtcgcaacagttgcactg
gggatgggctttgataagcctgatttagggtttgttatccattttcaaagacctagttct
gttgttcattattatcagcaagttggtcgtgcagggcgggctgttgaagaggcatatggc
attttattgagtggaacagaagacgatcagattacggacttctttatccgtagtgctttt
cctccacaaaaacatatatcggaagtaattagggtgcttgatgaatcaaatgacggtcta
tcttcttactctatggaaaaagttttgaatcttcggactaaacaaattatgaacaccata
gactatcttgctgctgagtcacccgcaccagttgtaaaagttgggacaaagtggaatgcg
actgccacagcttcaacgtatagaattaaccaagaaaacatagatgcaatcactgccatt
cgtcgccaagaacagcagcaaatgcatgagtacatgcaacatactggttgcttaatggca
tttctgcaagatgcactggatgatccagcacctcaaaattgtggaaaatgccaaaactgc
gcaccagagttacggctcgatgaaagctacgataatgacttggccaataaggcgggcctt
tttttgcgccggagttatcaacccgttaaagcaaaaaaaaaatggccaccccacaacccg
ttaccaacctacaatttttctggcatgatacgagagaatttaatagcatctgagggtcgt
gcgttaagtctctggcgtgatgccggatggggcgaattgatttataaagggaaatatgag
gataatcatttttctgatgtcttggtgacagcttgtgtggaaatgttgcgagaatgggca
cccgaggaggcacccaaatgggttacttgtataccatctatcaaccatcctgatttggta
ccaaatttcgcaaaacgtctggctagggcgttagagataccgttcgtagattgcgttgta
aaagtacaaaataatcaacaacaaaaaactatggaaaacagctttcaacaagcaagaaat
ttggatggtgtttttaaggttaatctcgaatctagagcatatagcccatgcttgcttatt
gatgacatggttgattctggttggactttcactgttgcggctgccctattacgacaagtt
ggttgcaccgcagtttatcctttagctctagcgctgaattcttaa |