Desulfotalea psychrophila: DP0526
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Entry
DP0526 CDS
T00192
Name
(GenBank) related to ATP-dependent dsDNA exonuclease (SBCC)
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dps
Desulfotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP0526
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DP0526
Archaeal homologous recombinant proteins
DP0526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
CENP-F_leu_zip
ABC_tran
nSTAND3
nSTAND_NTPase5
MMR_HSR1
RsgA_GTPase
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAG35255
UniProt:
Q6AQW9
LinkDB
All DBs
Position
complement(573880..577125)
Genome browser
AA seq
1081 aa
AA seq
DB search
MKILQLRFKNLNSLVGEWAIDFTAAEYLADGIFAITGPTGAGKSTILDAICLALYGKTPR
LDKVNKTTNEIMSRQTGECFAEIVFSTQAGIFSCHWGQHRARKKPGAKLADQRHEIADVS
SGQIIESKKSNVPKVVAEVTGMDFQQFTRSILLAQGGFDTFLKAAGDKRSPILEQITGTE
IYSTISQRVHERWRDERENLNLLQAETSSIVTLEPEQEKEIEQNLEAKQKQGTELVAKST
ETGKAITWLATTEGLQREIDSLTDEAAKLQTEVETFKPKRGKLEQAVRAASLDGTYASLT
ALRKQQSEDQAALKKEDAAFPELETSTNTQAEALKSTEQLTLKTKENLKSAAPLIQKIRS
LDQQITDRAKAVSEGDETCSREAAKIETDRQTWVKEQEKRTGAGRSLELAEQYLKEHAQD
EWLISGLAGIEEQFGNLLARQGEITQKETDLKNAATAMVEAAKKLEDTTKQSAIRRQKLE
DAAGNLRQGKDTLSELLGDNLLREYRTEKETLLREIAYIRKIEELEDHRAKLEDGKPCPL
CGSTEHPFAEGNVPVPDENEQKIELLTRLISRAEDQEAIVKKLEEAQTTARRDLENSEKL
ESNVANDKRAVEKDFTELQGGLEKFRSGFKELKLAVSGKLQPLGITEIPEAQVSSLLESL
KSRQKKWQEQVWQKSDIEKQIATINSEMKRLTAVIEIQSAALNEKQENLKRLQREHADGT
DQRKKLYGDKNPADQEGRLNEAIADAEKAEKRARSLNSGLQEKLTTARAHVESLGKRIEQ
REPDLKKAETDFSTALEPAGFAEEKQFLEARLTNNEREALSYRARKLDDAGTELKGRQKD
RETRLASEIAKKLTDKSLEELEAQFKEYGESLKELGDAIAGFRHRLNENRAIKERIKEKQ
PAIEAQKKECGRWDLLHELIGSADGKKYRDFAQGLTFELMVHQANRQLVKMTDRYLLIRD
AEKPLELQVVDNYQGGDLRSTKNLSGGESFIVSLALALGLSSMASRKVRVDSLFLDEGFG
TLDDDALEVALETLAGLRQEDKLIGVISHVPALKERIATQIQVMPLSGGRSSIQGPGCRL
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattacaacttcgatttaagaacctcaactccctggtgggggagtgggccatt
gattttaccgctgccgaatatctggccgatggtatttttgccattaccgggccgacgggg
gccggtaaatcaaccatccttgatgccatctgtcttgccctctatggcaaaaccccccgc
ctggacaaggtaaataagacgaccaacgagatcatgtcccgacagacgggtgaatgtttt
gccgagattgtcttcagtacccaggcgggaatcttctcctgtcactgggggcagcatcgg
gcccgaaaaaaaccgggtgctaagcttgccgatcagagacatgaaatagccgatgtcagc
agtggtcagatcatagagtcgaaaaagagcaatgttcccaaggtggtggcagaggtgacg
gggatggattttcagcagttcacccgttctattctcctggcccagggaggctttgatacc
ttcttgaaggcggccggtgataagcgcagtcccattcttgaacagattaccggtacggag
atatacagtaccatctcgcagagggtgcatgagcgttggcgtgatgagcgggaaaatctg
aacttgttgcaggccgaaacttccagcattgtgactctagagccggaacaggaaaaagag
attgagcagaatcttgaggcaaagcagaaacaggggactgagcttgtcgctaaatcaacc
gaaaccggcaaagccattacatggcttgccaccaccgaaggcctgcaaagggaaatagat
agccttacggatgaggcggcaaaactgcaaaccgaggttgaaactttcaagccgaaacgt
ggtaaacttgaacaggccgtcagagctgcttcgctggatgggacatatgcaagcctcacc
gccctccgcaaacagcagtctgaagatcaggctgcattgaaaaaagaggacgccgcgttt
cctgaactggagacatcgacaaatacgcaagctgaagcccttaaaagcaccgaacaactc
accctcaaaacaaaagagaatttgaaatcggcagcacctttgattcagaaaattcgatct
cttgatcaacagattacggaccgggcaaaggctgtttcggaaggcgatgagacctgtagc
agggaagcagcaaagattgagacggacaggcagacctgggtgaaagaacaggaaaagcgg
actggggctggaagatcactggagcttgcagaacaatacctcaaagagcatgcacaggat
gaatggctgatcagtggtctggcaggcatcgaagaacagttcggcaacctactcgccaga
caaggggagattactcagaaagaaaccgatctcaaaaatgctgctactgccatggtagaa
gcggcaaagaagctggaggataccacaaagcagagcgccatccgtaggcagaagcttgag
gatgccgcaggaaatcttcggcaaggcaaggataccttgagcgaattactgggcgataac
ttgctccgggaatatcgcaccgaaaaggagaccctgctacgtgaaatcgcatacatcaga
aagatcgaggagcttgaagatcaccgggctaagctggaagatggcaaaccttgtccgctc
tgcggttcaaccgagcatccttttgccgagggtaatgtaccggttcccgatgaaaacgag
cagaagatcgagttactgaccaggctgatctctagggcagaggatcaggaggctatcgtc
aaaaaactggaagaagcacaaaccactgcccgcagagatctggagaacagcgaaaagctg
gaaagcaatgtagccaacgataagagggccgttgaaaaagatttcacggaattgcagggt
ggtttggaaaaattccggagcggattcaaagaactgaagctggcggtatcagggaagctt
cagccgcttggcatcacggaaataccggaggctcaagtctcatcactgctcgaatctctc
aagtcacggcagaaaaaatggcaggaacaggtctggcaaaagagtgacatcgaaaaacag
atcgctaccatcaacagtgagatgaagcgtcttactgccgtgattgaaattcaaagcgcg
gctctgaatgaaaagcaggaaaacctgaaacggcttcaacgggaacatgccgatggaacg
gatcaacgcaagaaactgtatggcgacaaaaatcccgccgatcaagaaggccgtctgaac
gaggctattgcggatgccgagaaagcggaaaagagagccagaagcctgaacagtggactg
caggagaaactaacgactgcaagggcccatgttgaatccctgggaaaacgtattgagcaa
agagagccggatctaaaaaaagcggaaacagacttctcaacagcactggaaccggcgggc
tttgcagaggaaaaacagttccttgaggccaggctgacaaataatgagcgggaagccttg
tcttaccgggcaaggaaactggatgatgctgggacggaactgaagggcaggcagaaagac
cgggagacgcgcttggcctccgaaatagcaaagaagcttactgataaatctcttgaagag
ctggaggcgcagttcaaagagtatggagaatccctgaaagaattaggcgatgccattgcc
ggtttcaggcacaggctgaacgagaatagagcaatcaaggagcggattaaggaaaagcaa
cccgccatcgaggcacagaaaaaagagtgcggccgttgggatctgcttcatgaactgatc
ggttccgccgacggtaaaaaatatcgtgattttgcgcaagggttgacctttgaactgatg
gtgcatcaggccaaccgccaactggtgaagatgacagatcgttatctgcttatccgtgat
gcggaaaagcctctggaactgcaggttgtggataactatcagggcggtgatctgcgctcg
actaaaaacctctccggtggtgagagctttattgtcagtctggcccttgctctagggctc
tcctctatggccagtcgcaaggtgcgggtggattctctttttcttgatgagggatttggc
accctggatgatgacgctctggaggttgccctggagacgcttgctggtctgcggcaggaa
gataaacttatcggcgttatttcccatgtccccgcccttaaagaacggatagcaacgcaa
atacaggtgatgcctctttctggaggcaggagctccattcagggccctggctgtcgcctg
ctttaa
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