Desulfotalea psychrophila: DP0793
Help
Entry
DP0793 CDS
T00192
Name
(GenBank) probable RNA polymerase sigma factor (RpoD)
KO
K03086
RNA polymerase primary sigma factor
Organism
dps
Desulfotalea psychrophila
Pathway
dps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DP0793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dps03021
]
DP0793
Transcription machinery [BR:
dps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DP0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF4611
Motif
Other DBs
NCBI-ProteinID:
CAG35522
UniProt:
Q6AQ51
LinkDB
All DBs
Position
892034..893638
Genome browser
AA seq
534 aa
AA seq
DB search
MTIGKESLAGVGECRVSGEFSLDKTIVPLALTKQKKSSPVLGEPLVAGSDLLKEGVRAPK
RRISSSQRKQGDSTAAADSMNIYMREMGSLKLLKYDDERKLAQTIEKGKKQVQFAVLQST
LAMPILLQMKETIVENPGKISLFVGGIPDAQFDVIAEACDVFLANWQTCVGLDGQRKKYL
KKYLSPSLSADAREKLLFNILQCGKQIAELFEDRVLSSEYVNMVAQAAEDLSKRFRKIFV
ELIAGEGDLPEEEMRSPEELERLVDLQFIRESGSSLQSLNELLKEVEEGRFISKEAKEAL
VRANLRLVISVSKRFVNRGLQFSDLIQEGNIGLMKAVEKFDYRRGFKFSTYATWWIRQSI
TRGIADQGRTIRLPVHMIETINRMLRVSKDFYLEEHREPSVEEVAGQLGTEVDKVKSALK
IAKDAISLDTPVGDDGETYLGDFIVDKNCLGPDGFAMVASLKECLSQVLSSLSPREEKVL
KMRYGILEKREYTLEEVGRCFNVTRERIRQIEAQAISKLKHPSRCGDLKVFMTD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagggaaagaatcattggccggtgttggtgagtgtagggtgagcggtgaattt
tcattggataaaactattgttcccctggccttaacgaagcagaaaaaatcttctcctgtg
cttggagagcccttagtagcaggttctgatttgttgaaggaaggagtccgagcccctaag
cgccgtatttcttcttcgcagagaaagcagggtgattcgacggcagccgcagactccatg
aatatttatatgcgggagatggggagcctgaagcttcttaagtatgatgatgagcgaaaa
ctcgctcagactattgaaaaggggaaaaaacaggtgcagtttgctgttttacagtccacc
cttgccatgccaattcttctccagatgaaagaaactattgtagaaaaccctggtaaaata
tctctctttgtcggaggtattcccgatgctcaatttgatgttattgcagaggcgtgtgat
gtcttccttgccaattggcagacctgtgtggggcttgatgggcaacggaagaagtatctt
aagaaatatctttccccatctctgagcgcagatgccagggagaagctactctttaatatt
ttgcaatgtggaaagcagatagctgagctgtttgaagatagggtgctctcttctgagtat
gtcaacatggtcgcccaggcagccgaggatctctctaagcgatttcgtaaaatttttgtt
gagcttattgccggggaaggagacttgccggaggaggagatgcggagcccggaagagctt
gagcggttggttgatctgcagtttattcgcgaatcgggcagtagtctacaaagtcttaat
gaactgttaaaagaagttgaagagggtcgttttataagcaaagaggccaaggaggccttg
gtgcgggccaatcttcgtctagtgatttcggtgtccaagcgttttgttaatagaggtctg
caattttctgatcttatccaggagggtaatattggtttgatgaaggctgtggaaaaattt
gattaccgtcgtggttttaaattcagtacctatgcgacctggtggattcgccaatctatt
actcgtggcattgccgatcaggggagaacgatcaggttgcccgtgcatatgattgagacg
attaaccgaatgcttcgtgtgtcaaaggatttttatctggaggaacatcgggaaccgtcc
gtggaagaggtggcaggtcaactcgggacggaggttgacaaggttaagtctgctttgaaa
attgccaaagatgctatttcgctcgacacgccggtgggtgatgatggcgagacgtattta
ggtgattttattgttgataaaaattgtctcggccctgatggctttgccatggtggcaagc
cttaaggagtgtctcagtcaggtgctctcctctctttctccccgtgaggagaaggtgttg
aagatgcgttatggcatccttgaaaagcgggagtataccctggaagaggttggacgttgt
tttaatgtgactcgggaaagaatcaggcaaatcgaggcgcaggcaatctctaaattaaag
catccatcccgttgcggtgatctgaaggttttcatgaccgattag
DBGET
integrated database retrieval system
