Desulfotalea psychrophila: DP0882
Help
Entry
DP0882 CDS
T00192
Name
(GenBank) related to ATP-dependent DNA helicase II (Rep)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dps
Desulfotalea psychrophila
Pathway
dps03420
Nucleotide excision repair
dps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DP0882
03430 Mismatch repair
DP0882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP0882
Enzymes [BR:
dps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DP0882
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DP0882
MMR (mismatch excision repair)
Other MMR factors
DP0882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
CAG35611
UniProt:
Q6APW2
LinkDB
All DBs
Position
988369..990681
Genome browser
AA seq
770 aa
AA seq
DB search
MVELTAEQRRIIEHKGGHARVRAVAGSGKTTTMVERVAVLLARGVDPSHIMILMFNRSAR
DAFAASLKKRLRKTGYRGPEVRTFHALGLRLVESFVRRGALPAHRLVTEEGLRENLARRV
GQSLVGQGEAWSLRDDLEDFLTFIDLVKAKLASPAQVAREIGLPEKFASFIEGYSLFEDL
RLKEKIRFYSELINEPVLAMEEDAELRAWVENRVEHIIVDEYQDISNCQQGLLKMVAGSR
AQVMVVGDADQCIYEWRGAKPEYISTLFAEDFPAPRDYTLSFSFRYGHQLSLAANHLIAH
NIDKSRTLCRSHPLNVNTQIFTAELVAGERHPLVGIVRDWQDSGRSRAEIAVLVRLYGMS
VPVELALLEAGIPYQLQGGRTVFRCPEILALIGYLRFCDGSIVEISGQERKALVQEMLVQ
PHLGLKKGQMEHLLVSITASPLAAPALILGLVNEAMPAYQRKRLARLSDCWQWLVAEPGE
ARADKVLKRLVARLDLYAFYRDFASRQVSGENRIQICRSLIAFAEERARGVADFLLEFDR
LKKSDGAGADPLLITSIHRAKGCEWPLVILPGLEEGSFPFRRQQKESPSFTEVDDERRLF
YVGMTRAIERLYLLHPRDFFLQEAMVAGRAGHSLADDPLASCFLYEANLGISRRVGEAIA
RNEDVGHIEAVDADMANAYLQLQAGDHGQVVTRQQVKKLPVAAVAQPVTGGHRRLSSAEV
REGMEVVHDRFGRGQISAVIDRGQGKVRVAFEEEGEMILLLSYAKLYLRR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggtggagttgaccgcagagcagaggcggatcatagagcataagggcggtcatgcccgg
gttcgggccgttgccggttcgggtaagaccactaccatggtggaacgggtagcagtcctg
cttgcccgtggggtagatccctcccatatcatgatcctgatgtttaaccgatcggcgcgt
gatgcctttgccgcctccctgaaaaaacgtctccggaaaacggggtatcggggcccggag
gtgcgaaccttccatgccctggggctgcgtttggtggagagctttgtacgtcggggcgcc
ctgccggcccatcgccttgtcaccgaggaggggctgcgggaaaatctggcccgccgggtt
gggcagagtctggttggtcaaggggaggcttggagtctgcgggacgatctggaggatttt
cttacctttatagatctggtcaaggccaagctggcctcgcctgcccaagttgcccgggag
atagggctaccggaaaaatttgccagctttatagagggttatagtctctttgaggatctt
cgtctcaaggagaagattcgtttctacagtgagcttatcaatgaacctgttctggccatg
gaggaggatgcagagctacgggcctgggttgagaatcgggtggagcatattattgtcgat
gagtatcaggatatcagcaattgccagcaaggccttctaaaaatggttgccggtagccgg
gctcaggtaatggtggtgggtgatgccgatcagtgtatctatgagtggcgcggggctaag
ccggagtatatcagtaccctctttgccgaggactttcctgcgccccgagactataccctc
tccttctcttttcgttatggtcatcagctgtcgcttgcggcaaatcatctgattgcccat
aatattgataagagccgaactctctgtcgttcccatccactgaacgttaacactcagatc
tttactgctgagctggtggcgggcgagaggcatccgctggtggggattgttcgtgactgg
caggactcaggccgatcccgcgcagagatagccgttctggtccggctctacggcatgtcc
gttcccgttgaacttgccctgttggaggcgggtatcccctatcaactgcagggtggacgt
actgtttttcgctgcccggaaattctggccctgatcggttatctccgcttctgtgatggt
agtatagttgaaatttctggtcaagagcgtaaggcccttgttcaggagatgttggttcag
cctcatttgggtctgaaaaaggggcagatggagcatctgcttgtctctataacggcctct
cctctggccgctcctgcccttattctcggccttgttaacgaagccatgccagcttatcag
cgcaagagactggcgcgtctgtccgactgttggcagtggcttgtggcggagcccggggag
gcacgggccgataaggttctgaagaggttagtggcaaggcttgatctctacgcattctac
cgtgatttcgccagtcgtcaggtcagtggagagaaccggatccagatctgccgttctctc
attgcctttgccgaagaacgggcaaggggggtagctgactttcttcttgaatttgatcgg
cttaaaaagagtgatggtgccggggcagatcccctcttgatcacctcaattcatcgggcc
aagggctgcgagtggcccctggtgattctgccgggccttgaggagggtagctttcccttt
cgccgtcagcaaaaggagtcgccatcgtttacggaggtggatgatgagcgcaggctcttc
tatgtggggatgacccgggccattgagaggctctatcttctgcacccgagggattttttt
ctgcaggaggccatggtcgctggtcgtgccggtcattccctggccgatgatcctcttgca
agttgctttttatacgaggcaaatttaggcatcagtcgtcgggtgggggaggccatcgct
cgtaatgaagatgtgggccatatagaggcggtggatgctgatatggcaaatgcctatctg
cagttacaggcgggggatcatggtcaggtagttacccgacagcaggtcaaaaaattgcct
gtggcggcggttgcacaacctgtcactggtggccataggcgccttagttcagctgaggtc
agagagggtatggaggtggttcacgatcgctttggtcgtggccaaatatctgccgtgatc
gacaggggacagggaaaggtacgggtcgcctttgaggaggagggggagatgatcctgctt
ctctcctatgctaagctctatctgcgcaggtag
DBGET
integrated database retrieval system
