Desulfotalea psychrophila: DP0888
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Entry
DP0888 CDS
T00192
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dps
Desulfotalea psychrophila
Pathway
dps03030
DNA replication
dps03430
Mismatch repair
dps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DP0888
03430 Mismatch repair
DP0888
03440 Homologous recombination
DP0888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dps03032
]
DP0888
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP0888
Enzymes [BR:
dps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DP0888
DNA replication proteins [BR:
dps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DP0888
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DP0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAG35617
UniProt:
Q6APV6
LinkDB
All DBs
Position
complement(998175..999533)
Genome browser
AA seq
452 aa
AA seq
DB search
MADIKRTQFLQEIGKGQITESSLFLFYGERYLCQEAADALQKGLMERKGTIHKIDGATED
AGQTLSRLLSYSLLPGLQIYRVSESRIFQSKTIIEKIWKKAARAMRNGRLDAVLRYLTDM
AKLGGLSAQSLKGDQVFSEIGKTHWKKFFGFDKPDEDISWADQIMATAPEEQTSSPTDLV
DSYIQAFDRGLPAGNILILTAETVDKRQRFFSYCKKSATTIDCSVASGSNSAAQKDQLAV
VQEQLNKTLGLFQKKMAADAVRLFIDRVGCHPVAVINEAEKLALYAGDRPKISIDDVREL
TSQTREDALFEFTEALSSGQAAKSLIILKRILSNNIHSLAVLATLRNFYRRLLLIRGVQL
KHRVPWQQMPAQQFQNSYLPSLKENDEWAELIKGHPFAVYNNFKRAAEYSPNSLKNLLIL
VHGAEYRVKSSFLPQQLLLEELTIAILRNKKI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcagatataaaacgcacccagttcctccaggaaatcggcaagggccagataacagag
tcttcactctttctcttttacggcgaacggtacctctgtcaagaggcagcagatgccctg
cagaagggattgatggagaggaaggggaccatccacaagatagatggggccacggaggat
gcaggccaaaccctgtcccgcctgctcagctacagtcttcttcccggcctacagatatac
cgggtcagcgagagccgtatcttccagagcaagaccattatcgaaaaaatctggaaaaag
gccgcccgcgccatgcgcaacggccgacttgatgccgtcctccgctatctgaccgacatg
gcaaagctgggtggtctcagcgcccaatcactgaagggcgatcaggtcttcagtgaaata
ggaaaaacccactggaaaaaattctttggctttgataagcctgacgaagatatctcctgg
gccgaccagatcatggccactgcccccgaggagcagacttcctcgcccacggatctggtt
gactcctatatccaagcctttgatcgcggcctccccgccggcaacatcctcatactcacc
gccgaaaccgttgataaacggcaacgcttcttctcttactgcaagaaaagtgcgaccacc
attgactgctcggtggcaagtggcagcaactctgccgcccagaaggatcaactggcggtg
gtccaggaacagctgaataaaaccctgggactcttccaaaaaaagatggcggcagatgcg
gtaagactctttatcgaccgggtgggctgccatcccgtagccgttatcaatgaagcggaa
aagctcgccctctatgcaggggataggcctaagatcagcatcgatgatgtgcgggaactg
acaagccaaactcgcgaagatgccctctttgagttcaccgaggccctctccagcggccag
gcggctaagagccttatcatccttaaacggattttaagcaataacatccatagtcttgct
gtcctggcaacactgaggaacttctaccgcagactcctgttgataaggggggtacagtta
aagcatagagttccctggcagcaaatgcccgcccaacagttccaaaacagttacctgccc
agccttaaagaaaacgatgaatgggcagaactgatcaaaggacacccctttgccgtctat
aataattttaagagggcagctgaatactccccaaacagcctcaagaacctgctcattctt
gttcatggtgccgagtatcgggtaaaaagctcttttttgccacagcaacttttacttgag
gaactgacaattgccatcctccgtaacaaaaaaatataa
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