| Entry |
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| Name |
(GenBank) related to ATP-dependent RNA helicase (RhlE)
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| KO |
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| Organism |
dps Desulfotalea psychrophila
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:dps00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DP0898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dps03019]
DP0898
Enzymes [BR:dps01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DP0898
Messenger RNA biogenesis [BR:dps03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DP0898
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1010645..1012141
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| AA seq |
498 aa
MLKKLGRSIRRKFQSVFPQSGAGKDSLQEREVKQVQEVVAVPASSSASTSSPALSPSPAP
VAPVEEVVRKKPQPKRKPPWTLDKFVVPELEEKKRFHDFAIPLPLMHGIADLKFEYCTPI
QEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILAPTREL
VMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPGRLIDFHNKRLVN
FDNCQTLVIDEADRMLDMGFIPDVRRIVSWMPKKRDRQTLMFSATISSDVNNLSAQWCVD
PEVVEAEADQVTTDTVEQKVYLVTAEEKYNVLYNLIKENSDERIMIFANMKSETRKLADR
LKRNSIDCLLLSGDVPQNKRQSRLESFRTGKVKVLVATDVAGRGIHIDGISYVVNYTLPY
EPEDYVHRIGRTGRAGLAGKSVSFACEEGSFYLPDIEEYIGAKLDCVLPPEELLVHAPKG
TAPVAVAHKKYKPRKKTS |
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| NT seq |
1497 nt +upstreamnt +downstreamnt
atgttgaagaagctaggaagatccattcgtcggaagtttcaatcggtatttcctcagagc
ggagcggggaaagattctctgcaggagagggaggttaaacaggtgcaagaggttgttgcg
gtcccggcctcgtcttcggcctcgacctcgtctccggccttgtctccgtctccggccccg
gtagcgccagtggaagaggttgtcaggaaaaagccacagcctaagcgtaagccgccatgg
accttggataagtttgttgttcctgagctggaagagaaaaaacgattccatgatttcgcc
attccccttcctctgatgcatggtattgccgatttgaagtttgagtactgtactcctatc
caggagcagtccctggaagcggttcttgccggtaaggatcttattggcaaggccaataca
ggtaccggtaagacagctgtttttctggtgggcgttatggctcgtttattggccgacaag
aaaggtggtttgggcaagagaacgccacgggctctgatacttgcccccacccgtgagttg
gtcatgcaaatagttaaagatgcgaaaaaattgggtaggtataccggtgttaacgcggac
gctgtttatggtggagctgagtatgagaagcagatggagttgcttaagaggggaaagaca
gacattgttgtcgccactccgggtcgcctgatcgattttcataataagagacttgttaat
tttgataactgtcagaccctggttattgacgaagcagatcgaatgcttgatatgggtttt
attcccgatgtgcgccggattgtttcctggatgccgaagaagagggatcgtcagaccttg
atgttctctgcgacaatctccagcgatgtgaataatctctctgcccagtggtgcgttgat
ccagaggtggttgaggcagaggcagatcaggtgactactgataccgttgagcagaaggtc
tatctggttactgcagaagaaaaatataatgtgctctataacctgattaaggaaaatagt
gacgagcgcatcatgatctttgccaatatgaagagtgagacaagaaagctggccgaccgc
ttaaagagaaacagtattgattgtctcctgctctcaggagatgtgccgcaaaacaaacgg
cagtcaaggttggagagctttcgtacaggtaaggtcaaggtgctggtggcaacggatgta
gctgggcgtggaattcatattgatggcatcagctatgtggttaactataccctgccctat
gagccagaggattatgtccatcgcattggtcgaaccggtcgggctgggcttgccggcaag
tcagtgagctttgcctgtgaggagggctctttttatctgccggatatagaggagtatatc
ggtgcaaaactggactgtgttcttccgccggaagaattattggtccatgcgcccaagggt
acagcccctgtagctgtggcccataaaaaatataagccacgtaaaaagacctcttaa |
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