Desulfotalea psychrophila: DP0900
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Entry
DP0900 CDS
T00192
Name
(GenBank) probable DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
dps
Desulfotalea psychrophila
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dps03032
]
DP0900
03036 Chromosome and associated proteins [BR:
dps03036
]
DP0900
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP0900
DNA replication proteins [BR:
dps03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DP0900
Chromosome and associated proteins [BR:
dps03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DP0900
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DP0900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CAG35629
UniProt:
Q6APU5
LinkDB
All DBs
Position
1014346..1014639
Genome browser
AA seq
97 aa
AA seq
DB search
MKRMLKKDIIDSVSEELSMQKQDVSVAADVILETISNALARDRRVELRGFGSFSVRSRKP
RTTKNPRTGQVMDIPERRTLHFTMSKSLKESLISDMD
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagaatgttaaagaaagatattatcgatagtgtaagtgaagagctgtccatgcaa
aagcaggatgtaagtgttgcagcagatgttatccttgaaacgatttccaatgcacttgca
cgtgatcgtcgagtggagctacgaggttttggtagtttttctgtacgcagccgtaagccg
cgtacaaccaaaaatcctcgtacaggtcaggtgatggatattcctgagcgcagaacactg
cactttaccatgagtaagtcgctgaaagagtctcttattagcgatatggactaa
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