Desulfotalea psychrophila: DP1152
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Entry
DP1152 CDS
T00192
Name
(GenBank) probable DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dps
Desulfotalea psychrophila
Pathway
dps03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DP1152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dps03021
]
DP1152
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP1152
Enzymes [BR:
dps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DP1152
Transcription machinery [BR:
dps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DP1152
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DP1152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
TPK_catalytic
53-BP1_Tudor
Motif
Other DBs
NCBI-ProteinID:
CAG35881
UniProt:
Q6AP43
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All DBs
Position
1286188..1287219
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AA seq
343 aa
AA seq
DB search
MTQEIDEKIPVYRNWHELIRPEKVEIDQSNHSETYGKFICQPLERGFATTIGNSLRRILL
SSIQGAAITTVKIEGALHELTSMKDVKEDVSEIILNLKQVRLKLNCEESQTVRIEKQGPG
PVVAGDIIPSAFVEIMNEDHILCNLTSDMTFCAELTVEWGKGYQPAENQEKDDLTVGQIP
IDAIFTPVKKIQYVVSSARVGQQTDYDKLTYEIETDGSVRPEDALAYSAKILKEQLDIFI
NFDETAVEPEKKAVETEEKQENPYLDKPVEDLELSVRSANCLKNADINFIGDLVQRTDQE
MLKTKNFGRKSLNEIKTLLQDMDLTLGVKLEGWNAPSDAETEE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcgacgaaaaaatacctgtttatcgtaattggcatgagctgatcaga
cccgaaaaagtagaaattgatcagagtaatcattctgaaacctacggtaaatttatctgt
caaccgcttgagcgtggctttgcgacgacaatcggtaactctttgcgaaggatccttctg
tcttctattcagggtgcagctattaccactgtaaagatagagggcgctttgcatgaactt
acatccatgaaggacgttaaagaggatgtaagtgagattattctcaatcttaagcaggtt
cgtttaaagcttaattgcgaagagtctcaaacagtacgtattgaaaaacaaggaccagga
cctgttgttgctggtgatattattccatctgcattcgttgaaatcatgaacgaagatcat
attctctgtaatcttacaagtgatatgaccttttgtgctgagttgactgtcgaatggggt
aaaggatatcaacctgctgaaaatcaagagaaagatgacctcaccgtaggtcagattccc
attgatgcgatctttactcctgtaaagaaaattcagtatgttgtctcttctgcccgtgtt
ggtcaacagactgattatgataagttgacctacgagatagaaacagatggtagcgtacga
cctgaagatgctttggcttactcggcaaagattcttaaggagcagcttgatatttttatt
aactttgatgaaactgcggtcgagcctgaaaagaaagctgttgagaccgaagagaagcag
gaaaatccttatctcgacaagcctgttgaagatcttgaattatctgtacgttctgcaaac
tgtctcaagaatgcggatatcaattttatcggtgatttggtacagagaactgatcaggaa
atgttgaagaccaagaactttggtcgtaaatctcttaacgagattaaaacattgttacaa
gatatggatttgacccttggtgtgaagcttgagggttggaatgctccttctgatgcagag
actgaagaataa
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