Desulfotalea psychrophila: DP1178
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Entry
DP1178 CDS
T00192
Name
(GenBank) probable oligopeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
dps
Desulfotalea psychrophila
Pathway
dps02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DP1178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dps02000
]
DP1178
Transporters [BR:
dps02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DP1178
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Paralog
GFIT
Motif
Pfam:
ABC_tran
BPD_transp_1
oligo_HPY
AAA_21
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
CAG35907
UniProt:
Q6AP17
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All DBs
Position
complement(1316189..1318048)
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AA seq
619 aa
AA seq
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MHTILKIREKTNAYIFTGTVLLAIVFMFSTIGSLVSAFDPLLTAPAIRLTAPGTVHWMGT
DDVGRDVFTRVICGIRMSMIIGFAVALISGLVGTLAGVSAAYYPVTSKVIMRIVDSIMAF
PTIILAIILAGIMGAGMRNIIIALSISYFPMIARVVRNATAEVLATEYVESAEVLGKSNT
YIIFRYILPNIASPLIVQMTYTFAMAILNESILSFLGVGIQIPTPSLGGMASDGRNYISI
APWIIGFPGLVISWIVLSLDLLGDGLREIMDPKGRVAPTDFQKNVAPPQGADKTRDIEMQ
DLLRIENLTVVAADEKHTTKIVSEISLAVRNGETMGIIGESGCGKSITAMSILKLTEPNI
YIDKGHIDWGNICLSELSESSLRKICGKEIGMIFQEPMTSLNPVFTIKQQLSAPIRLHLG
LSKTGIHQRCIRLMQDVGIKDPEKTLKSYPHELSGGMCQRVAIAIAISCDPQLLIADEPT
TALDVTIQAQILGILKKLIHTNHMALLIISHDMGVIASLSENITVMYGGEIVEQDTRDNI
IEQASHPYTKKLIGAAEELYDGTDELTLVRGNVPLPGDNIIGCKFAPRCTLSTQKCHTEH
PPLTQKEDGAGTVRCWNYL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgattcttaaaataagagaaaaaacaaacgcgtatatttttacggggaccgtg
cttctagccatcgttttcatgttcagcaccattggttcgctcgtctccgcttttgatccc
ctgctcacagcgccggccatacggttgactgctccgggcactgttcactggatggggact
gacgatgttgggcgggatgtcttcaccagagtcatctgtggcattagaatgtccatgata
atcggctttgccgtagcccttataagcggacttgtgggtactcttgcgggcgtcagtgcc
gcatattatcccgtcacctcaaaagtcatcatgcgcatcgtcgatagcattatggctttc
cccacgatcatcctcgccatcatacttgccgggattatgggggcaggcatgaggaatatc
atcattgctctgtccatttcgtattttccgatgattgctcgggtagtacgaaatgcaaca
gctgaagttctcgcgaccgaatatgtggaatcagccgaagtcctcggtaaatcaaatacc
tacatcatctttcgctatatactcccaaatatcgcctctccgctgatcgtccagatgacc
tacacctttgccatggccattttgaatgaatcaatcctgagtttcctcggagtcggaata
caaattccgacgccgagtctggggggaatggccagcgatggccgaaactatatcagtatc
gctccctggatcatcggtttcccggggctggtgatttcatggatagtcctttccctggat
cttctgggcgacgggttgagagaaataatggatcccaagggcagggtcgcaccaactgat
tttcaaaaaaacgtggcacccccccagggtgcagacaagacaagagatattgagatgcaa
gaccttttgagaatagaaaacctgaccgttgtggcagcagacgaaaaacacacaactaaa
attgtcagtgaaatttcccttgctgtccgcaacggcgaaaccatggggattatcggggaa
tcaggatgtgggaaaagcattaccgcaatgagcatcctgaagctgaccgaaccaaacatc
tatattgacaaggggcacatagactggggaaatatctgcctgagcgaactttcagagagc
agcttgcgaaaaatatgtgggaaagaaatcggcatgatcttccaggaacccatgacatct
ctcaacccggtttttaccattaaacaacaactttccgcacccatcagattgcatcttggc
ctgagcaaaacaggcattcatcagcgctgtatcaggctcatgcaggatgtgggtatcaaa
gatcctgaaaaaacacttaaatcatatccccacgaactttcaggcggtatgtgccagaga
gtcgccatcgccatcgccatatcctgtgaccctcaacttctgatcgcagacgagcccaca
acagcccttgatgtcaccatccaggcccagatcctgggaatcctcaaaaaactgatccac
acaaatcacatggcgcttctcatcatctcccatgatatgggggtcattgcctctttatcc
gaaaacataacggttatgtacggtggagaaattgttgagcaggacacgagggacaatatc
atagaacaggcttcccatccctatacgaaaaagctgataggcgcggctgaagaactctat
gacggtaccgatgaactgacccttgtcagaggaaacgtccccctgcccggagacaatatc
ataggatgcaaatttgccccgcgatgtactctcagtacacaaaaatgccatacagaacac
ccgccactgacacaaaaagaagatggggcaggaactgtaagatgttggaactatctgtaa
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