Desulfotalea psychrophila: DP1663
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Entry
DP1663 CDS
T00192
Name
(GenBank) related to DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dps
Desulfotalea psychrophila
Pathway
dps03030
DNA replication
dps03430
Mismatch repair
dps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DP1663
03430 Mismatch repair
DP1663
03440 Homologous recombination
DP1663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dps03032
]
DP1663
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP1663
Enzymes [BR:
dps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DP1663
DNA replication proteins [BR:
dps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DP1663
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DP1663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAG36392
UniProt:
Q6AMN3
LinkDB
All DBs
Position
complement(1857794..1861393)
Genome browser
AA seq
1199 aa
AA seq
DB search
MLYTSRFFKARRASLPFLQEQNPMSAGFTHLHVHTQYSLLDGAIRLPDLIDKCKEFGMDS
VAITDHGAMYGALEFYTKAKKAGIKPIVGSELYIAPGDMREQKKINGQTAYHIVLLAMNK
TGYQNLMKMASIAQSDGFYYKPRIDMAVLQEYNEGIIALTACLHGQVPYLIMKGDMDGAR
KKAQELHDIFGDRLYFELQENSIAEQQPVNAGLKILAKEMGVKLVATNDCHYLNRQEAHA
HEVLLCIQMGKTINDTNRFRFSSDEFYFKSPKEMERAFHHCPEAIASTQEIADRCNLELT
FDDYYFPNFPVPEGESLSTMFTTACWEGLETRFEEMRALGSYKDNTEKTYKARLEMEIDV
INTMGFPGYFLIVADFINWAKSKDIPVGPGRGSGAGSIAAYAMKITNIDPMPYGLIFERF
LNIERKSMPDFDIDFCQDRRGEVIDYVRRKYGGAEHVAQIITYGSMKARGVIRDVGRALD
IPFTEVDRIAKLVPDQLKMTLLKALAEEPKLQEAADNDPQIQELISVSKTLEGLARHTSV
HAAGVVISPEPMTHYLPTCRGGEADERVTQYDMKHTEMTGLIKFDFLGLKTLTVIDKAVK
HVHADKKIPLNIDAIPMDDPKTFDLLCRGDALGVFQLESEGMRELLVKMAPEQFSDLIAL
VALYRPGPLDSGMVDDFVETKHGRAEANYPLPQLKPVLEETYGVIVYQEQVMKIASILAN
YSLGDADILRRAMGKKIAAVMDEEKVKFMEGAEKNEVPLDKAEYVFDLMAKFAGYGFNKS
HSAAYALVSYQTAYLKAHHPAQFMAALLSCDMNNTDKVVRYINECKEQHIEVLPPDINES
FKDFTVINDRIRFGMAAVKNVGGAALDSIIEERQADGPYTSISDFCNRVDSRKVNSRVIE
SLVKSGSFDSLGYKRSQFIEVLEKAMEQAKAVQRDKQSGQISLFAVAQPSAGQKDQEVNS
LHMPDMEEWSDKQKLLFEKETVGFYITGHPLDDVMPELKTIIDAQIHDLVDKDEDQAVRI
GGLVRTYKKHRSQKGDAMAFITIEDIFEAVEVVVFPRTYAECEEILEGTEPIVVLGRVQQ
TERGPKIIAERIDTIQQAREKYTDKVSLRLQAEGLDRMKLEKIKKHFYGYHGNCPVGITL
KIPQKGEVDIDVTGDMTLRPCRQLSDGVEEILGYQALFFSKKAIDLPARKKKWVPKKDK
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
gtgttgtatactagccgttttttcaaggcccgcagggccagtttaccttttttgcaggag
caaaacccaatgagtgcaggttttacccatcttcatgtccatacccaatacagccttcta
gacggggccatccgtcttcccgatctcattgataaatgcaaagaatttggcatggacagc
gtggccatcactgaccacggggccatgtatggtgccctggaattttacaccaaggcaaaa
aaagcagggataaaacccatcgtcggcagtgaactctatattgcccccggcgatatgcgc
gagcaaaaaaaaatcaatgggcagacagcctaccatatcgtccttctggccatgaacaaa
acaggttatcaaaacctgatgaagatggccagtatcgcccaatccgacggtttttactat
aaaccacgaattgatatggccgtgttgcaggaatataacgagggaatcattgccctcacc
gcctgtctgcacggtcaggtaccctatctgatcatgaagggtgatatggacggggcccgg
aaaaaggctcaggagctccatgatatatttggtgatcgtctctactttgagttgcaggaa
aacagcattgctgagcagcaaccggtaaatgccggactcaaaatcctggcaaaggagatg
ggagtcaaactagtcgccaccaacgattgtcactacctcaaccggcaagaggcccatgcc
catgaggtactgctctgtatccagatgggtaagactataaacgataccaatcgttttcgt
ttctcctccgacgagttttattttaaatctcccaaagagatggaacgggcctttcatcac
tgtccggaagccatcgccagcacccaggaaattgccgacagatgcaaccttgagctcacc
ttcgatgactactattttcccaattttcccgtgcccgagggagagagtctctccaccatg
ttcaccaccgcatgttgggagggtttagagacccgttttgaggaaatgcgcgccctggga
agctataaggacaataccgaaaaaacctacaaggcccgtcttgaaatggagattgatgtt
atcaataccatgggctttcctggttacttccttatcgtggccgactttatcaactgggcc
aagagcaaggatatccccgtagggcccggccgtggttccggtgccggtagtattgccgcc
tacgccatgaagatcaccaatattgatcccatgccctatggactgatctttgagagattt
ctcaatattgaaagaaagtccatgccggattttgatatcgatttttgccaggatcgccgc
ggagaggtcatcgactatgtacgccgtaaatacggtggcgccgaacacgtagcccagatt
atcacctatggttccatgaaggcccgaggcgttattcgcgatgtgggccgggcacttgac
atcccctttaccgaagtggatcgcattgccaagctggtgcccgaccagctaaaaatgacc
ctgttaaaggccctggcagaggaacccaagctgcaggaggccgctgacaatgatccacag
atacaagaacttatctcggtctcgaaaacgctggaagggctggctcgtcatacctctgtg
catgcggccggtgtcgttatctcccccgagcccatgacccactatctgcccacctgccgt
ggtggtgaagcggatgaacgggtcacccagtatgatatgaagcatacggagatgacggga
cttatcaaatttgactttcttggtcttaagaccctgaccgtcatcgataaggcggtcaag
cacgtccatgccgacaaaaagattccgcttaatatcgacgccatccccatggatgacccc
aagaccttcgacctgctctgccgcggtgatgccctgggtgtcttccagctagagagcgag
gggatgcgggaactgttggtgaagatggcaccggaacagttcagtgatctcattgccctg
gtggccctctatcgccctggccccctggattccggtatggtggatgactttgtcgaaact
aaacacggtcgggccgaagccaactatcccctgccccaacttaaacccgttttagaggag
acctacggcgttatcgtctaccaggaacaggtaatgaagatcgccagtatccttgccaat
tactcacttggtgatgccgatattctacgccgggccatgggcaaaaagatcgctgcggta
atggacgaggagaaggtcaagtttatggagggggcggaaaaaaacgaggtgcccctggac
aaggccgaatatgtctttgatctcatggccaagtttgccggttacggatttaataaatcc
cactccgcagcctacgccctggtctcctaccagacggcctatctcaaggcccaccacccc
gcccaatttatggcggccctgctctcctgcgatatgaacaacaccgataaggtggtgcgt
tatatcaatgagtgcaaagagcagcatatagaggtcttaccccctgatatcaacgagagc
ttcaaggatttcaccgttatcaacgaccggatccgttttggtatggccgcagtgaaaaat
gttggtggggcagccctggattccatcatcgaagaacgacaggcagacgggccctatacc
tccatcagtgatttttgtaaccgggtagactcccgcaaggtaaattcacgggtcatcgaa
tccctggttaaatctggttcctttgattctctgggctataaacggtcacagtttatcgag
gtgttagaaaaggccatggaacaggccaaggccgtgcaaagagataaacagagtggtcag
atatctctttttgccgtggcccaacccagcgctggacaaaaagatcaggaggtaaacagc
ctacatatgcccgacatggaggagtggagcgataagcagaagctactctttgaaaaggag
actgtaggtttttatatcaccggccaccccttagacgatgttatgccagagctgaagacc
atcatcgacgcccaaatccacgaccttgtcgataaggatgaggatcaggcggtgcgtatt
ggcggactggtacgtacctataaaaagcatcggagccaaaagggcgatgccatggccttt
atcaccatcgaagatatttttgaggcggtggaggtggtggtctttccccgcacctatgcc
gaatgtgaggagatccttgagggtacggaacccatcgtcgtacttggcagggtacagcag
actgagcgaggcccgaagatcatcgccgagcgaatcgacaccatccaacaggcacgggaa
aaatataccgataaggtcagcctgcgcctgcaagccgagggacttgaccggatgaaactg
gaaaagataaaaaaacatttctacggctaccacggcaactgtccggtgggtatcaccctc
aaaatcccccagaagggcgaggtagatatcgatgtaacaggggatatgaccctacgccca
tgccggcaactttccgacggagtagaggagattctcggttatcaggccctcttcttcagc
aagaaggccattgatctgccagcccggaaaaaaaaatgggttcccaaaaaagataagtag
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