Desulfotalea psychrophila: DP2608
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Entry
DP2608 CDS
T00192
Name
(GenBank) probable polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dps
Desulfotalea psychrophila
Pathway
dps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DP2608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dps03019
]
DP2608
03016 Transfer RNA biogenesis [BR:
dps03016
]
DP2608
Enzymes [BR:
dps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DP2608
Messenger RNA biogenesis [BR:
dps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DP2608
Transfer RNA biogenesis [BR:
dps03016
]
Prokaryotic type
tRNA degradation factors
DP2608
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_PDCD11
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
CAG37337
UniProt:
Q6AJY9
LinkDB
All DBs
Position
complement(2963987..2966065)
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AA seq
692 aa
AA seq
DB search
MFNKVEADIDGKLISIETGKLAKQASGSIVISCGGTVVLVTVVGAKTSNPNVDFLPLTIE
YQEKFSAVGRVPGNYFRREIGRPSDQEVLTCRIIDRPLRPLFPEGYRSETQVIATVLSAD
QVNSPDVLALTGASAALSISHIPFAGPVAGGRIAYIDGKYVLNPTFAELESSSMDLMVAC
TRNAIVMVEGKADELSEDEILGAIFFAFENLQPLINLQDELQRANGLEKIVVESPVIDAE
LKAKVVEIAAAGMQKVYTTVDKLERGKVYDDLKKEVVAQLDTEEGLRASEISSLLSDFKK
TYLREKTVNTGVRIGGRAWDEIRDISSETEYLPKTHGSALFTRGETQALVTATLGSERDK
QRVETLNGETSRRFMLHYNFPPYCVGEARFLRGPSRRDIGHGTLATRGLEAVLPSEEDFP
YAIRVVSEILESNGSSSMASVCGGSMAMMDAGVPLKRPVSGIAMGLIKEGEGVAILSDIL
GDEDHLGDMDFKVVGTCDGITALQMDIKIDGVSRDIMSNALDQAKRGRMHILEEMSKGIA
EARAEVVEHAPKYFIHKISQDKIRDIIGPGGKIIKELSAQYDAKIEVDDSGLVKMFVANG
ALAEALVERVKSITAEVEVGAVYTGKVKTIKDFGAFVEILPGTDGLVHISELALERVKDV
TDVVNEGDTIEVKVLDVDNRGRIRLSRKALLG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagttgaagctgatattgatggcaagcttatttccattgaaactggaaaa
ttagccaagcaggcatctggatcgattgtgatcagttgtggtggtaccgtggtacttgtg
accgtggttggcgccaagaccagcaatcccaatgttgactttttgccactcaccattgag
tatcaagaaaagttttctgcagtaggtcgtgttcccggtaactattttcgtcgtgagatt
ggtcgtccttctgaccaagaggtgcttacctgtcgaattattgatcgtccccttcgtccg
ctcttccctgaaggttatagatcagagactcaagttattgccaccgtactttcggcagat
caggtgaactcacctgatgttcttgccttgaccggtgcttcagcggcactttctatttct
catattccatttgcaggtccagtggctggtggtcgtattgcctatattgatggtaaatat
gtacttaacccaacattcgcagagcttgaatcttcttccatggatctgatggttgcctgt
acccgtaacgctattgttatggttgagggtaaggccgacgaactcagtgaagatgaaatt
cttggcgctattttctttgcctttgaaaaccttcagccccttatcaatcttcaggatgaa
ctccaacgagctaatggtttagaaaaaatcgttgttgagtcccctgtgattgatgcagaa
cttaaggcaaaggttgttgagattgctgcggccggtatgcaaaaagtttataccaccgta
gacaagttggagcgtggtaaggtttatgatgatctgaagaaagaagttgtggctcagctt
gacactgaagagggtctgcgtgcctctgagatcagcagccttctctctgatttcaagaag
acttatctgcgtgaaaagactgtaaacacaggcgtgcgtattggtggtcgtgcctgggat
gagattcgtgatatctccagtgaaacagaatatttgccaaagacccatggatctgctctt
tttacccgtggtgagactcaggcacttgttactgcaacccttggtagtgagcgcgataag
caacgtgttgagacccttaacggcgagacttctcgtcgttttatgcttcactataacttc
cctccatactgtgttggcgaggctcgtttccttcgtggtccttcccgacgtgatattggt
catggaactcttgcaacccgtggcttagaggctgttcttccaagtgaagaagatttccca
tatgcaattcgtgtggtttccgagattcttgaatctaacggatcatcgtctatggcttca
gtttgtggtggtagtatggccatgatggatgcgggtgtaccccttaagcgtcctgtttcc
ggtattgccatggggcttatcaaggaaggcgagggtgttgctattctctctgatatcctt
ggtgatgaggatcacttgggcgatatggatttcaaagtggttggtacctgtgatggtatt
accgctctgcagatggatatcaagattgacggtgttagccgtgatattatgtccaatgct
cttgatcaggcaaaacgtggtcgtatgcacatcttggaagagatgagcaagggtattgcc
gaggctcgtgccgaggtggttgagcatgcgcctaagtatttcattcataagatcagccaa
gacaagattcgtgacattattggacccggcggtaagatcatcaaagagctttctgcacag
tacgatgcaaaaatcgaagttgatgacagcggtttggtaaaaatgtttgttgctaacggt
gcacttgccgaggcccttgtggagagagtaaaatctatcactgcagaggtagaggttgga
gcggtatataccggaaaggttaagaccatcaaagactttggtgcctttgtagagattctt
cctggtaccgatggattggttcatatctctgagcttgcccttgagcgagttaaggatgtg
accgatgttgtcaacgagggcgacaccatagaggtgaaggttcttgatgttgataatcgc
ggccgtatccgtcttagtcgtaaggcattgctcggttaa
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