Deinococcus proteolyticus: Deipr_0422
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Entry
Deipr_0422 CDS
T01426
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dpt
Deinococcus proteolyticus
Pathway
dpt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Deipr_0422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpt03021
]
Deipr_0422
03400 DNA repair and recombination proteins [BR:
dpt03400
]
Deipr_0422
Enzymes [BR:
dpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Deipr_0422
Transcription machinery [BR:
dpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Deipr_0422
DNA repair and recombination proteins [BR:
dpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Deipr_0422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
IMS_HHH
DUF371
Motif
Other DBs
NCBI-ProteinID:
ADY25592
UniProt:
F0RJW6
LinkDB
All DBs
Position
432041..433027
Genome browser
AA seq
328 aa
AA seq
DB search
MDQKRPQLKARVEGNYGEFVLEPLKRGYGVTIGNPIRRILMSSIQGTAVTSVYIEDVLHE
FSTIPGVKEDVIRLILNLKELVVKFHAPGPKTLTLRAQGQGVIRASDFEVPSDAEIVNPD
LEIANLADGGQLVMEVRVEEGEGYVPADKHATKDRINSIPVDAMFNPVRRVAYHVENTRV
GRQTDLDKLILRIWTDGSASPQDVLDQAIDILREELLVFGSVEELEDSESSALDYTISAE
TVQPEAEVAPESAAPAEESVSSGEPSVSLEGLGLTTRVLHSLKEEGIDNVDALCALSDRD
LKKVPGIGERSLDEIKQQLAQFGKALRD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagcgccctcaactcaaagcccgcgtcgaaggaaattatggcgagttcgtg
ctcgaaccactcaagcgtggttacggggtcaccatcggcaaccctattcggcgcattctg
atgtcctcgattcagggtacggccgtcaccagtgtttacattgaagacgtcctgcacgag
ttctcgaccattcctggagtgaaggaagatgtcattcgactgattctgaacctcaaggag
ctggtggtgaagtttcacgctcccggccccaagaccctgacgctgcgtgctcagggccag
ggagtcatccgcgcctcggatttcgaagtgcccagtgacgccgaaatcgtcaacccggac
ctggaaatcgccaacctggccgatggtggccagctggtgatggaagtgcgtgtcgaagaa
ggcgaaggctacgtgcccgccgacaagcacgccaccaaggaccgcatcaattcgattccg
gtggacgcgatgttcaacccggtgcgccgtgtcgcctaccacgtggaaaacacccgtgtg
ggccgtcagaccgacctagacaagctcattctgcgcatctggaccgatggcagcgccagc
ccccaggacgtcctggaccaggcgattgacatcctgcgtgaagaactgctggtcttcggt
tccgtagaggagctggaagatagcgaaagcagcgcactggactacaccatttctgctgag
acggtacagcccgaagctgaagtggctcccgaaagcgctgctccagccgaagaaagcgtc
agtagcggtgaacccagtgtcagcctggaagggctgggcctgaccacccgcgtgctccac
tcgctgaaagaagaaggcatcgacaacgtggatgccctgtgtgccctgagcgaccgcgac
ctgaaaaaggtgcccggcatcggtgaacgcagcctggacgaaatcaagcagcagctggcc
cagttcggtaaagccctgcgcgactga
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