Deinococcus proteolyticus: Deipr_0711
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Entry
Deipr_0711 CDS
T01426
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dpt
Deinococcus proteolyticus
Pathway
dpt03410
Base excision repair
dpt03430
Mismatch repair
dpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Deipr_0711
03430 Mismatch repair
Deipr_0711
03440 Homologous recombination
Deipr_0711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpt03400
]
Deipr_0711
DNA repair and recombination proteins [BR:
dpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Deipr_0711
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Deipr_0711
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Deipr_0711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_C_Deinoc
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADY25871
UniProt:
F0RLG7
LinkDB
All DBs
Position
729518..731605
Genome browser
AA seq
695 aa
AA seq
DB search
MTPAARWQLARPAPLPALRDLMERYGLSAPAAQWVYGRGLRPELLSPEHRLTPNPGLREA
ARRLVQAIRAGKRIRIHGDYDADGVTATATLVLGLQALDADVHGFIPHRLEEGYGIHPSK
LDEHAQSCDLLVTVDCGVSNREEVAGLLERGTDVIVTDHHAPPPTFPDCLVVHPELTANY
DPALHNLTGAGVAYHLLWAVHQELGLPEPRPLSALATLGTIADVAPLTGENRALVGVGLA
ALPGTDIVGLRALLELSGVAQPSARDVAFVLAPRINAAGRMGEADRALELLTTSSPQRAG
ALAQYLEVRNEERRELQDRMYREALDLVDPGERALLVTRPDWHPGVMGIVASKLLEQFYR
PVYIVAQGKGSVRSTPGISAVGGLRYSHDLLLRYGGHPGAAGFSLEEANLPRLRDRLQDY
AAQFPVPVPHVTLDAPLPATYATLDLWQELQAFEPYGEGLRPPLWHLRSPLSGTRLVGRN
RDCLQFQAAGLRGIKFREQDAATGPRDLAVRLRRSEFRGRVSAEWEAEELRPPQALTLAA
PQAQVAAARLAVRRTPEQVMARLKAVGRGVAVYAGETLRASLAARLPELHYLQPGDPLPA
LPLVLFDLPPTGVLERWLQERPAAAPPVTFAWGRETLAALDAAPQGAEGYHRFQWAHAYL
TLDEAGWDGAVRALSGLGVEEAATPPLPLEAVGDD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
ttgacccccgcggcccgctggcaactggcccgccccgctccgctgcccgccctgcgagac
ctcatggagcgctacggcctctcggcgccggcagcgcagtgggtgtacggacgcggcctg
cgccctgagctgctgtctcccgaacaccgcctgacccctaaccctggcctgcgtgaagcg
gcgcggcggctggtgcaggccattcgcgccggcaagcgcatccgcattcacggcgactac
gacgccgacggcgtgaccgccacagccacgctggtgctgggcctgcaggccctggacgcc
gatgtccacggctttattccacaccggctggaggagggctacggcatccacccctccaag
ctggacgagcacgcgcagagctgtgacctgttggtcacagtggactgcggtgtgtccaac
cgcgaagaggtggccggcctgctggaacgcggcaccgatgtcatcgtgaccgaccaccat
gcaccgccgccgaccttccccgactgtctggtggtccacccggagctgacggccaactac
gacccggccctccacaacctgaccggcgcgggggtggcctaccatctgctgtgggccgtg
catcaggagctggggctgcccgagccgcgcccgctgagtgccctggctactctgggcacc
attgccgacgtggccccgctgaccggcgaaaaccgggccctggtgggtgtgggcctggcg
gccctgcccggcactgacatcgtgggactgcgggcactgctggaactgagtggggtggcc
cagccctcggcgcgggacgtggcctttgtgctggctccccgtatcaacgcggccgggcgg
atgggcgaagcggaccgggcgctggagctgctcaccacgtccagcccgcagcgggcgggg
gcgctggcgcagtacctggaggtccgcaacgaggagcgccgcgagctgcaagaccggatg
taccgcgaggcgctggacctggtggaccccggcgaacgggccctgctggtcacccgcccg
gactggcaccctggcgtgatggggattgtggccagcaagctgctggagcagttctaccgg
ccggtgtatatcgtggcgcagggcaaggggtcggtgcgctccacgccggggatcagcgcg
gtgggggggctgcgctacagccacgacctgctgctcaggtacggcgggcatcctggcgcg
gcaggcttctccctggaagaagccaacctgccccggctgcgtgaccgcctgcaggactac
gccgcgcagttcccggtgccagtgccgcacgtcacgctggatgcgccgctgcctgccacc
tacgccacgctggacctgtggcaggagctgcaagccttcgagccctacggcgaggggctg
cggccaccgctgtggcacctgcgttcacccctgagcggcacccgtctggtcggcaggaac
agagactgcctgcagttccaggcggcggggctgcgtgggatcaagttccgcgagcaagac
gcggccacaggcccccgtgacctggccgtgcggctgcggcgctcggagttccggggccgg
gtgtcggccgagtgggaagcggaagaactgcgcccgccccaggcgctgaccctggccgcg
cctcaggcccaggtggctgcggcgcgtttggcggtgcgccgcacccccgagcaggtcatg
gcccgcctgaaggccgtgggccgtggcgtggctgtctatgccggtgaaacactgcgggcc
tcgctcgccgcccgcttgccggagctgcactacctgcagcccggcgacccgctgccagcg
ctgccgctggtgctgtttgacctgccgcccaccggcgtcttggagcgctggctgcaggag
cggcctgctgcggcgccgcccgtcacctttgcctgggggcgcgaaacactggccgcgctg
gacgccgcgccccagggagcggaaggctaccaccgcttccagtgggcccacgcctacctg
acactggacgaagccggctgggacggggctgtccgggcactgagcggactgggggtagag
gaggcagccacgccgcccctgcccctggaagctgtgggcgacgactga
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