Deinococcus proteolyticus: Deipr_0803
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Entry
Deipr_0803 CDS
T01426
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dpt
Deinococcus proteolyticus
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpt03032
]
Deipr_0803
03400 DNA repair and recombination proteins [BR:
dpt03400
]
Deipr_0803
Enzymes [BR:
dpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deipr_0803
DNA replication proteins [BR:
dpt03032
]
Prokaryotic type
DNA Topoisomerases
Deipr_0803
DNA repair and recombination proteins [BR:
dpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deipr_0803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ADY25959
UniProt:
F0RM39
LinkDB
All DBs
Position
complement(846215..847246)
Genome browser
AA seq
343 aa
AA seq
DB search
MPSRTEALQDEYLRREGQEAGKFKYFYPDGKRYTDRAGLERIAALAVPPGYKDVYVSPDA
DTELQAFGRDTAGRLQYRYHADFVQGRALKKWRRLSRFAGTLADLRALTTADLRRAELPP
RKVLALMTRLLHVAHFRVGSDTYARAHKTYGLSTLRQRHVSVEGTTVTFNFRGKHGIQQS
KALVDRTLAANIEKLLELPGPHLFQTVEEGTRRRVKAAELNAYLREQIGPFTAKDFRTWG
GTLLAAEFLAESGTVDTERGAKKVLVECVQTVAEDLGNTPAVTRAHYICPVIFDRYLEGK
VLDDYEPRAGRTPAALEGLTRSEVALKRMLDSEQTIRTRARRA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgcaccgaagccctgcaagacgagtacctgcgccgcgaaggccaggaggcc
ggcaagttcaagtatttctatccagacggcaagcgctacaccgacagggcgggcctggag
cgcatcgccgcgctggcggtgccgcccggctacaaggacgtgtatgtctcgcccgacgcc
gacaccgagttgcaggcgtttgggcgcgacacggcggggcggctgcagtaccgctatcac
gcggacttcgtgcagggccgggcgctgaaaaagtggcggcggctctcgcgctttgccggc
accctggccgacctgagagcactcaccaccgccgacctgcgccgcgctgagctgccccca
cgcaaggtgctggccctgatgacccggctgctgcatgtggcccacttccgggtgggcagc
gacacctacgcccgcgcccacaagacctacggcctcagcacgctgcgccagcggcacgtg
tcggtcgagggcaccaccgtgactttcaatttcaggggaaagcacggcatccagcagagc
aaggcgctggtggaccgcaccctggccgccaacatcgaaaagctgctggagctgccgggg
ccgcacctgtttcagacggtggaagagggcacccgccgccgggtcaaggccgccgagctg
aacgcctatctgcgggaacagatcggcccctttaccgccaaggatttccgcacctggggc
ggcacgctgctggccgccgaattcctggccgagtccggcaccgtggacaccgaacgcggc
gccaaaaaggtgctggtggagtgcgtgcagacggtagcggaggacctcggcaacaccccg
gccgtgacccgcgcccactacatctgcccggtcatcttcgaccgctacctggagggcaag
gtgctggacgactacgagccgcgcgccggccgcaccccggcggcgctggaaggcctgacc
cgttccgaggtggccctcaagcgcatgctggactccgagcagaccatccgcacgcgggcg
cgccgggcgtaa
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