Deinococcus proteolyticus: Deipr_1032
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Entry
Deipr_1032 CDS
T01426
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dpt
Deinococcus proteolyticus
Pathway
dpt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Deipr_1032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpt03400
]
Deipr_1032
Enzymes [BR:
dpt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Deipr_1032
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Deipr_1032
DNA repair and recombination proteins [BR:
dpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Deipr_1032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Zn_ribbon_IS1595
DZR
RNHCP
IBR_1
Motif
Other DBs
NCBI-ProteinID:
ADY26188
UniProt:
F0RN46
LinkDB
All DBs
Position
1085126..1085941
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AA seq
271 aa
AA seq
DB search
MPELPEVETTRRKIAPLVTGRTIVDIRHLSPKKYPDTGLAHGRTVLEPQRRGKYLILPLA
QGPDAAPDRELIVHLGMTGGFRLEEGPHTRLTLQLDSGELHFNDPRRFGRVRVVQAGDYA
ALPTLAAMGPEPLEDSFELEAFAQAAAKAGAVKPWLLSQRPVAGVGNIYADEALWRARIH
PAQRHLSAEQAARLHAAVREVMREAVELGGSSLGNGVSNYRQHDGDWGGFQLQHAAYGRG
GQPCPRCGTTIEKTVLGQRGTHFCPQCQVLE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtggaaaccacccgccgcaagattgccccgctggtcaccggg
cgcaccattgtggacattcggcacctcagcccgaaaaagtacccggacacagggctggcg
cacggccgcactgtgctggagccgcagcgccggggcaagtacctgattctgccgctggca
caaggcccagacgctgcgcccgaccgcgaactcatcgtgcatctgggcatgaccgggggc
ttccggctggaagaaggcccgcatacccggctgaccctgcagctggacagcggcgagctg
cacttcaacgacccacgccgctttggccgggtgcgggtggttcaggccggcgactacgcg
gcgctgcccacactggcggcgatgggccccgagccgctggaagacagcttcgagctggaa
gcgttcgcgcaggccgccgccaaggccggcgccgtcaagccctggctgctcagtcagcgg
cccgtggcgggtgtgggcaacatctacgccgacgaggcgctgtggcgggcccgcatccac
cccgcacagaggcacctgagcgccgagcaggcggcgcgtctgcacgccgccgtccgcgag
gtgatgcgcgaggcggtggagctgggcggctccagcctggggaacggcgtcagcaactac
cgccagcatgacggcgactggggcggctttcagctgcagcatgccgcctatggccggggc
gggcagccctgtccccgctgcggcacgaccatagaaaagaccgtgctgggccagcgcggc
acccacttttgcccacagtgtcaggtgttggagtaa
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