Deinococcus proteolyticus: Deipr_1102
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Entry
Deipr_1102 CDS
T01426
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dpt
Deinococcus proteolyticus
Pathway
dpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deipr_1102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpt03019
]
Deipr_1102
03400 DNA repair and recombination proteins [BR:
dpt03400
]
Deipr_1102
Enzymes [BR:
dpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deipr_1102
Messenger RNA biogenesis [BR:
dpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Deipr_1102
DNA repair and recombination proteins [BR:
dpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Deipr_1102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ADY26254
UniProt:
F0RNB2
LinkDB
All DBs
Position
complement(1159555..1161399)
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AA seq
614 aa
AA seq
DB search
MTAPQPAAPAQPPARAYDLLRDLWGYGSFRWRQGEIVAQLAAGGDALVLMPTGGGKSLCY
QLPSLLRPGVGVVVSPLIALMQDQVDTLRQLGIRAAFLNSSLSAEGVREVEAALRAGELD
LLYVAPERLLMEGTLRLLAGVEVALFAIDEAHCVSQWGHDFRPEYQGLGVLAERFPGVPR
IALTATADDRTRADMVSVLGLEGAPQFVASFDRPNIQYRIAGKDNAKRQLLEFIRTEHAG
DAGIVYCLSRKSVEDTAQFLSDSGVPALAYHAGLDHAQRQEAQARFLREEGLVVVATVAF
GMGIDKPDVRFVAHLDLPKSMEGYYQETGRAGRDGEPSTAWMVYGLGDVVNLRRMLAGSA
APEWVRRIEGAKLDALLAYCETTACRRESLLAYFGEAYQGPCGNCDNCISPPQVREMTRE
AQMALSAAVRTGNRYGAAHLTDVLLGRDTDKVRQWGHHTLPTFGVGAEHDERTWRGVLRQ
MVSLGYLEAGEHYGLSATPKSRELLKGEVPFLLREEVLQPRRKTASKARAAAPSDLPPSA
QPAFEALREWRGQEAKAQGVPAYIIFDNKTLAAIAALRPSSLATLGTVSGVGAKKLEQYG
QAVLEVLGGVGEPA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccccagcctgccgcccctgctcagccgcctgcccgcgcctacgacctgctc
cgtgacctgtggggctacggttccttccgctggcgccagggcgagattgtggcgcaactg
gcggccggcggcgacgccctggtgctgatgcccaccggcggcggcaagagcctgtgctac
cagctgccttcgctgctgcggcccggcgtgggcgtggtggtcagcccgctgattgccctg
atgcaggaccaggtggataccctgcggcagctgggcatccgggcggcgttcctcaattcc
agcctgagtgccgagggggtgcgcgaagtggaagcggcgctgcgtgcaggcgaactggac
ctgctgtacgtggcccccgagcgcttgctgatggaaggcacgctgcggctgctggccggc
gtggaagtggccctgttcgccattgacgaggcgcactgcgtgagccagtggggccacgat
tttcggcccgagtatcagggtctcggcgtgctggcagagcgcttccccggcgtgccgcgc
atcgccctgaccgccaccgccgacgaccgcacccgcgccgacatggtgagcgtgctgggg
ctggagggagcgccgcagttcgtggcctccttcgaccggcccaacatccagtaccgcatc
gccggaaaggacaacgccaagcggcagctgctggagtttatccgcaccgaacatgccggg
gacgccggcatcgtgtactgtctgtcgcgcaagtcggtagaggacaccgcgcagttcctg
agcgacagcggtgttccggccctggcctaccacgccgggctggaccatgcccagcggcag
gaggcgcaggcccgttttctgcgcgaagaagggctggtggtggtcgccaccgtggctttc
ggcatgggcatagacaagccggatgtccgcttcgtggcgcacctggacctgcccaaaagc
atggagggctactaccaggaaaccggccgggccgggcgcgacggggagccgagcaccgcc
tggatggtgtatggcttaggcgacgtggtgaacctacgccgcatgctggcgggaagcgcg
gcgcccgagtgggtacggcgtatcgagggagccaagctggacgccttgctggcctactgt
gagaccaccgcctgccgccgcgagagcctgctggcctacttcggggaggcgtaccagggg
ccgtgcggcaactgcgacaactgcatcagccctccccaggtccgtgagatgacccgcgag
gcccagatggccctgagtgccgctgtccgtaccggcaaccgctacggcgccgcccacctg
accgacgtgctgctgggccgcgacaccgacaaggtgcggcagtggggccaccacactctg
cctactttcggcgtgggcgccgagcacgacgagcgcacctggcgcggggtgctgcgccag
atggtcagcctgggttatctggaagccggcgagcattacggcctgagtgccactcccaag
agccgcgaactgctgaagggtgaggtgccgttcctgctgcgtgaagaggtgttgcagccg
cgccgcaagaccgcttccaaggccagggcggcggctcccagcgacctgccgcccagcgcc
cagcctgctttcgaggcgctgcgtgagtggcgcgggcaggaagccaaggcgcagggggtg
cccgcctacatcatcttcgacaacaagacactggcggccattgcggcgctgcggccctct
tcactggcgacgctgggcacggtcagcggcgtgggcgccaagaagttggagcagtacggc
caggcggtgctggaggtgctgggcggagtaggggagccagcctaa
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