Deinococcus proteolyticus: Deipr_1268
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Entry
Deipr_1268 CDS
T01426
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dpt
Deinococcus proteolyticus
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpt03016
]
Deipr_1268
Enzymes [BR:
dpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Deipr_1268
Transfer RNA biogenesis [BR:
dpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Deipr_1268
Prokaryotic type
Deipr_1268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADY26417
UniProt:
F0RP08
LinkDB
All DBs
Position
complement(1344207..1345154)
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AA seq
315 aa
AA seq
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MPVFAVDKPLNLTSHDVVGRVRRLRGTRRVGHTGTLDPLATGVLVVAVEDSTKVVQFMER
DSKDYLAWISLGAGTPTLDAEGPVEVQAPVPPLTAEAVEAALAQFVGNIEQVPPQYSAIQ
VGGVRAYDVARRGGTLDLPARPVTIHRLDLLGSYPTLAEAPAHVSRGADGWQPDPAGRPV
PLPPALGDFPTLLVRASVGSGTYLRSLARDLGAALGVPAHLAGLLRTRAGRYDLADCLEL
DAVAEAAGHSDLSALPFEVVEVPAQTATELRQGKRPRRPETGRLTVTHAGELVAVVDGDG
AQWKVVRAWAGEKEG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtatttgccgtggacaaaccgctgaacctcacttctcacgatgtggtgggccgg
gtacggcggctgcgtggcacgcggcgggtgggccacaccggcacgctggacccgctggcg
acgggggtgctggtggtggcggtggaggacagcaccaaggtggtgcagttcatggagcgc
gactccaaggattacctggcctggataagcctcggcgcaggcacgcccacccttgacgcc
gaaggcccggttgaggtgcaggcccccgtcccgccgctgacggctgaagcggtagaggcc
gcgctggcgcagttcgtgggcaatatcgagcaagtgcctccgcaatattcggccattcag
gtgggcggcgtgcgggcgtacgacgtggcgcggcgggggggcacgctggacctgcccgcg
cggcccgtgaccattcaccgcctggacctgctgggtagttaccccaccctggccgaggct
ccagctcacgtcagccggggcgcggacggctggcagcctgaccccgctggccgcccggtg
cccctgccgcccgcgctgggcgactttccgacgctgctggtgcgggcgtcggtgggcagc
ggcacctatctgcgctcgctggcacgtgacctcggtgcggcgctgggcgtgcctgcccac
ctcgcgggactgctgcggacccgtgcaggccgctacgacctggcggactgcctggagctg
gacgcagttgcagaagccgcaggccacagcgacctgagcgccctgccgtttgaggtggta
gaggtgcccgcgcagaccgccaccgagctgaggcagggcaagcgcccccgccgccccgaa
accggccgtctgaccgtgacccacgcgggcgagctggtggcggtggtggacggtgacggc
gcacagtggaaagttgtgcgggcctgggcaggggagaaggagggctga
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