Deinococcus proteolyticus: Deipr_1381
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Entry
Deipr_1381 CDS
T01426
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dpt
Deinococcus proteolyticus
Pathway
dpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deipr_1381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpt03400
]
Deipr_1381
Enzymes [BR:
dpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Deipr_1381
DNA repair and recombination proteins [BR:
dpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deipr_1381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
HHH_5
AAA_11
AAA_22
nSTAND3
AAA_28
AAA_25
AAA_16
PhoH
Helicase_RecD
NTPase_1
NPHP3_N
KTI12
AAA
Motif
Other DBs
NCBI-ProteinID:
ADY26527
UniProt:
F0RJ90
LinkDB
All DBs
Position
complement(1469312..1471462)
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AA seq
716 aa
AA seq
DB search
MTADLSTEPFDIQGAVQRVRFRAESGFTVLTAQITGPYGEDEDAVLVGLMPPLDAGDGFK
ALVKLEEHKEYGYQYRALNLVLSAQPADLTEAGVAAYLQARVGGVGKVLAGRIASTFGDA
TFDVLESDPERLLQVPGVSASTLHKMVASWGEQGQERRTLAALQGVGLSISQAQRALKHF
GETAVETLQADIFTLTEVEGIGFLTADKLARERGMELTDPRRLTAAAVYALQLAGTTGGH
SYLPRARAEKGVVYYTRVSEELAHEAVSRALELDRLKADYSAEGDERIYLPQALRAEKKL
ARLIRTLLATPPAEEWEVPPGAGIGLSDEQASVLEMLRGERLVVLTGGPGTGKSTATKAV
VEVAEELRLEVGLCAPTGKAARRLGEVTNRDAHTVHRLLGYGPNGFRHNHLEPLPYDLVV
VDEVSMMGDALMLALLNAVAPGARVLLVGDAEQLPPIDAGLPLAALTQAATTVRLSRVYR
QAAENPIIGAAHRLLHAQPPQWQFVNDTKMDERSDTRGQLSLTEVEADVGARRVSLLVRE
LGGPTRAQVLSPMRRGPLGVERLNAVLQQTFNPGEGGVKIGADALARAGDVVVQTKNDYE
NEIFNGTLGTVLEERGSRLLVDFDGNIVELGGMELFNLQLGYALTVHRAQGSEWPAVVGV
LHEAHMPMLSRPLAYTALTRAREEFHAVGSASAWARAAASQKEERYTALLERVRGR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgacctctcgaccgagccgttcgacattcagggcgcggtgcagcgcgtgcgt
ttccgggccgagagcggctttaccgtcctgaccgcgcaaatcactggcccttacggtgag
gatgaggacgcggtcttggtcggcctgatgccgccgctggacgcgggcgacggcttcaag
gcactggtgaaactagaggagcacaaggaatacggctaccagtaccgcgccctgaatctg
gtgctctcggcgcagcctgccgacctcaccgaagcgggcgtggcggcctacctacaagcc
cgcgtgggcggcgtgggtaaagtgctggcggggcggatagcctcaaccttcggggacgcg
acctttgacgtgctggaaagcgaccctgagcggctgctgcaagtgccgggggtgtcggcc
tccacgctgcacaagatggtggcaagctggggcgagcagggccaggagcggcgcacgctg
gcggcgttgcagggggtggggctgagcatctcgcaggcgcagcgggcgctgaagcacttt
ggcgaaacggcggtggaaaccttgcaggctgacatcttcaccctaaccgaggtggaaggc
atcggctttctgaccgccgacaaactggcccgcgagcggggtatggaactgactgacccg
cgccgcctgactgctgccgccgtgtatgcgctgcagctggcgggcacgaccggcggccac
tcttacctgccccgcgcccgtgctgagaaaggcgtggtgtactacacccgcgtgtccgaa
gaattggcccacgaggcggtcagccgcgccctggaactggaccgccttaaggccgactac
agcgctgaaggggatgagcgcatctacctcccgcaggccctgcgtgccgagaagaaactg
gcccgcctgattcgcaccctgctggcgaccccgcccgccgaggagtgggaggtgccgccg
ggcgcaggcatcggcctgagcgacgagcaggccagcgtgctggaaatgctgcgcggcgag
cggctggtggtgctgaccggcggcccaggcaccggcaaaagcaccgccaccaaagcggtg
gtagaagtggccgaggaactgcggctggaagtgggcctctgcgccccgacgggcaaggcg
gcccggcggctgggcgaggtcacgaaccgcgacgcgcacacggtacaccggctgctgggc
tacggcccgaacgggttcaggcacaatcatctggagccgctgccctatgacctggtggtg
gtggacgaggtgtccatgatgggcgacgcgctgatgctggcgctgctgaatgcggtggcc
cccggagcgcgggtactgctggtaggcgacgccgagcagctcccgccgattgacgcgggc
ctgccgctggccgccctcacgcaggcggcgaccaccgtgcggctgagccgggtctaccgc
caagccgccgagaaccccatcatcggcgcggcgcatcggttgctgcacgctcagcccccg
cagtggcagttcgtgaatgacaccaaaatggatgagcgcagtgatacccgcggccagctc
agcctgaccgaggtggaagccgatgtgggtgcccgccgcgtttcgctgctggtgcgtgaa
ctgggtggccccacgcgggcgcaggtgctttcacccatgcggcgcggtccgctgggggta
gagcggctgaatgccgtactccagcagaccttcaaccctggcgagggcggcgtaaaaatc
ggcgcggacgccctggcccgcgcaggtgacgtggtggtgcagaccaaaaacgactacgag
aacgaaatcttcaacggcaccctgggcaccgtgctggaagagcgcggctcgcggctgctg
gtggactttgacggcaacatcgtggagctgggcggcatggagctgtttaacctgcaactc
ggctacgcgctgaccgttcaccgcgcccagggcagcgagtggcccgccgtggtgggcgtg
ctgcacgaagcgcacatgccgatgctctcgcgcccgctggcctacaccgcactgacccgc
gcccgcgaagaatttcatgcggtgggttcggcttcggcctgggcgcgggccgccgcttcg
cagaaagaggagcggtacacagcgctgctggaacgggtgcgggggcggtga
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