Deinococcus proteolyticus: Deipr_1711
Help
Entry
Deipr_1711 CDS
T01426
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dpt
Deinococcus proteolyticus
Pathway
dpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deipr_1711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpt03019
]
Deipr_1711
03110 Chaperones and folding catalysts [BR:
dpt03110
]
Deipr_1711
03029 Mitochondrial biogenesis [BR:
dpt03029
]
Deipr_1711
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpt04147
]
Deipr_1711
Enzymes [BR:
dpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Deipr_1711
Messenger RNA biogenesis [BR:
dpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Deipr_1711
Chaperones and folding catalysts [BR:
dpt03110
]
Heat shock proteins
HSP60 / Chaperonin
Deipr_1711
Mitochondrial biogenesis [BR:
dpt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Deipr_1711
Exosome [BR:
dpt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Deipr_1711
Exosomal proteins of other body fluids (saliva and urine)
Deipr_1711
Exosomal proteins of breast cancer cells
Deipr_1711
Exosomal proteins of colorectal cancer cells
Deipr_1711
Exosomal proteins of bladder cancer cells
Deipr_1711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADY26845
UniProt:
F0RL53
LinkDB
All DBs
Position
complement(1819675..1821315)
Genome browser
AA seq
546 aa
AA seq
DB search
MPKQLVFDESARRSMERGVNAVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVE
LEDKLENIGAQLLKEVASKTNDITGDGTTTATVLGQAVVKEGLRNVAAGANPLALKRGIE
KAVAAAIEEIQKLAVPVEDSDAIKKVAGISANDPQVGEEIASAMDKVGKEGVITIEESKG
FDTEVDVVEGMQFDKGYISPYFITNTESMEAVLENPFILINEKKISALKDLLPVLEKVAQ
TGRPLLIIAEDVDGEALATLVVNKLRGTLNIAAVKAPGFGDRRKEMLRDIAAVTGGEVVS
EDLGHKLENVGMDMLGSAATVRITKDETTIVDGKGEQSQIDSRVNAIKAELDSTDSDYAR
EKLQERLAKLAGGVAVIRVGAATETELKEKKHRYEDALSTARSAVEEGIVAGGGTTLLRV
IPAVRRAAEGLEGDEATGARILIRALEEPARQIAANAGEEGSVIVNAVINSDKVRYGFNA
ATGEYVEDMVAAGIVDPAKVTRTALQNAASIGALILTTEAIVADKPEPEKAPAGAPDMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacaactggtattcgacgaatcggcccgccgcagcatggagcgtggcgtcaac
gctgtcgccaacgctgtcaaagtgacccttggcccgcgtggccgcaacgtggtcatcgag
aagaagttcggcagccccaccattaccaaggacggcgtgaccgtcgccaaggaagtggag
ctggaagacaagctggagaacatcggcgcgcagctgctgaaagaagtcgccagcaagacc
aacgacatcacgggtgacggcaccaccaccgccaccgtgctgggtcaggccgtggtcaaa
gaaggcctgcgcaacgtggccgctggtgccaaccccctggccctcaagcgcggtatcgaa
aaggccgtggccgccgccatcgaggaaatccagaagctggccgtgccggtagaagacagc
gacgccatcaagaaggtggccggcatctccgccaacgacccccaggtgggtgaagaaatc
gcctccgccatggacaaggtgggcaaagaaggcgtcatcactatcgaagagagcaaaggc
ttcgacaccgaagtggacgtggtggaaggcatgcagttcgacaagggctacatcagcccc
tacttcatcaccaacaccgagagcatggaagccgtgctggaaaatcccttcatcctgatc
aacgagaagaagatcagcgccctgaaggacctgctgcccgtgctggaaaaagtggcccag
accggccgccccctcctgatcatcgccgaagacgtggacggcgaagcgctggcgaccctg
gtggtcaacaagctgcgcggtaccctgaacatcgccgccgtgaaggctcctggcttcggt
gaccgccgcaaggaaatgctgcgcgacatcgctgctgtgaccggcggtgaagtggtcagc
gaagacctcggccacaagctggaaaacgtgggcatggacatgctgggcagcgccgccacc
gtgcgcatcaccaaggacgaaaccaccatcgtggacggcaagggtgagcagagccagatc
gacagccgcgtgaacgccatcaaggccgagctggacagcaccgactctgactacgcccgc
gagaagctgcaggagcgcctcgccaagctggccggcggcgtggccgtgatccgcgtgggc
gccgccaccgaaaccgaactgaaggaaaagaagcaccgctacgaagacgccctgtccacc
gcccgctcggctgtggaagaaggcatcgtggccgggggcggcaccaccctgctgcgcgtg
attcccgctgtgcgccgggccgctgaaggcctggaaggcgacgaggctactggcgcccgc
atcctgatccgtgccctggaagagcccgcccgccagattgccgccaacgccggtgaagaa
ggcagcgtcatcgtgaacgccgtcatcaactccgacaaggtccgctacggcttcaacgcc
gctaccggcgagtacgtggaagacatggtggccgccggtatcgtggaccctgccaaggtg
acccgcaccgcgctgcagaacgccgccagcatcggcgcgctgatcctgaccaccgaagcc
atcgtggccgacaagcccgagcccgaaaaggctcccgccggcgcccccgacatgggcggc
atgggcggcatggacttctga
DBGET
integrated database retrieval system
