Deinococcus proteolyticus: Deipr_2353
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Entry
Deipr_2353 CDS
T01426
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dpt
Deinococcus proteolyticus
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpt03032
]
Deipr_2353
03400 DNA repair and recombination proteins [BR:
dpt03400
]
Deipr_2353
Enzymes [BR:
dpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deipr_2353
DNA replication proteins [BR:
dpt03032
]
Prokaryotic type
DNA Topoisomerases
Deipr_2353
DNA repair and recombination proteins [BR:
dpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deipr_2353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
ADY27477
UniProt:
F0RQB8
LinkDB
All DBs
Position
pDEIPR02:56926..58914
Genome browser
AA seq
662 aa
AA seq
DB search
MNLLIVESPAKAKKIQGFLGSGWTVRASVGHVRDLPGSGQTIPEKYRALPWINLGVDVEG
NYRTVYLVYEDKKKIIRDLKHACKDADEVLLATDPDREGESIAWHLAQELGLKAPKRVTY
QEITETAIKKAIANPRSIDMNLVAAQESRRILDRLVGYGSSPLVSKALGTSDKRRSHSAG
RVQSAALMMLAGREHARMGFASASVNGVKVRIGTAPEFQATLIRLGTQTIATPASFGPDG
ALKADAQEHLLLSSAQAKEAAGILTNSSLTVVQVSKKPLVRRAPAPLTTSALQQAASKLK
FSAKKTADTAQRLYEQGLITYIRTDSPALSDEAVRLGQNVLRELFGAQVLPEQVRRHAAK
GNAQEAHEAIRPTEFTAPEQTGLEGDELALYRLIYETTLASLMKDAAGERTSVLLDSGKG
HLLAAAGTVITDPGYLQLLKDEEDGEEDASLPALQKQQSIPCVGAEVTSAQSKPPARFTE
GKLIAALEKVGIGRPSTYPSILGTLQNRGYVVNEKGALHVTPLGLVATGYLSVQLPSIVD
RHFTARMEEDLDRIAGGELRATTYLDTVWKNGLALSIAQAGVAAPQVAVPGFPGAVLSSK
NSEVTLSYQGRTAILHEKVLSEELTEKNLERLMNGQAVRGQRASRPKTTGSKSSTRKNTS
LA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctcctgatcgtcgagtcgccggccaaggccaaaaagattcagggctttctcggc
agcggatggaccgttcgggccagtgtgggccacgtacgcgacctgcccggcagcgggcag
accattccggagaagtaccgggcactgccctggatcaacctcggggtagacgtggaggga
aattaccgcacggtctatttggtgtacgaagacaagaaaaagatcatccgtgacctgaaa
catgcctgcaaggacgctgacgaagtgctgctggccaccgacccggacagggaaggggag
agcatcgcgtggcacctcgcacaggagctgggactgaaagcgccaaaacgggtcacctac
caggagatcacggaaaccgccatcaaaaaggccatcgccaacccacgaagtatcgacatg
aacctggtcgctgcccaggaatctcgccgcatcctggaccggctggtgggctacggctcc
agcccgctggtctcgaaggcactgggcacgagcgacaagcgccgctcgcactcggcagga
cgggtccagtcggcggcgctgatgatgctcgcaggccgtgagcacgcacgcatgggcttt
gcaagtgccagcgtgaacggggtcaaggtccgcatcggcacggccccggagtttcaggcc
acactgattcgcctcggcacacagaccatcgccaccccggcgtcgttcggcccggacggc
gcacttaaagcggacgcgcaggagcatctgctgctaagcagcgcccaggccaaagaggcg
gcaggcatcctcacgaactcctcgctcacggtggtgcaggtctcgaagaagccactggtg
cgccgcgctcccgctccgctgaccaccagtgccctacagcaggcggccagcaaactgaag
ttcagcgctaaaaagacagccgacaccgcccagcgtctttacgagcagggcctcatcacc
tacattcggaccgacagcccggccctgagcgacgaggcggtccgtttgggccaaaacgta
ctgcgggagctgttcggggcgcaggtgctccccgaacaggtgcgccggcacgcggcgaaa
ggcaacgcccaggaagcacatgaagccattcggccgactgaattcacggccccagagcaa
acgggccttgagggagacgagctggccctctaccggctgatctacgaaacgacgctggcc
tcgctgatgaaagacgccgccggggaacgcaccagcgtcctgctggacagcggaaaaggg
cacctgctggccgctgccggaacggtcatcaccgaccccggctacctgcagttgctgaaa
gacgaagaagacggggaggaggacgcctcactgcccgccttgcaaaagcagcagagcata
ccgtgtgtcggcgcagaggtcaccagcgcccagagcaagcccccagcccgctttaccgaa
ggcaagctgatcgctgcgctggagaaagtgggcatcggtagaccctcgacatatcccagc
atcctgggaacactccagaaccgcggctatgtggtcaacgaaaaaggggcgctgcacgtc
acaccgctcggactggtggccaccggctacctgagcgtgcagctgcccagcatcgtggac
cggcacttcaccgcccgcatggaagaagaccttgaccgcatcgcagggggggagctgcgg
gccaccacgtacctcgacacggtctggaaaaacggtctggccttatccatcgcgcaagca
ggcgtggccgccccacaagtggccgtgcccggctttccaggagccgtgctgagcagcaaa
aacagtgaggtgaccctaagctatcagggacggaccgccatactgcacgaaaaagtgctg
tccgaggaactgaccgaaaagaatctggagcggttgatgaatggacaggccgtaagaggt
cagcgggccagccgcccgaaaaccactggctctaaatccagcacccgcaagaacacatcc
ctcgcctga
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