Dermatophagoides pteronyssinus (European house dust mite): 113790544
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Entry
113790544 CDS
T05775
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113790544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpte03019
]
113790544
Messenger RNA biogenesis [BR:
dpte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113790544
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113790544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
113790544
NCBI-ProteinID:
XP_027196027
UniProt:
A0A6P6XRD4
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MADRRKLLAEIDRCLKKVNEGVETFDEIWVKVHNATNANQKEKYEADLKKEIKKLQRQRD
QIKTWLASSEVKDKRELSNYRRLIEMQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDDITNWLSNSIEKLSEQVELFESELENLQTTQKKGKKDREKQERHDFVKNRVEKHRYHI
KQLETLMRMLDNETVEVDQIKKIKDDIEYYIESSQDAEFQDNEYIYDDLDLEDMQAFRAN
NVVDLTNVLGNAAGKNEKGSATKTNDNSTTSSTANNNTTTANVSMENVDCNSLPESNNNN
QNAYSNSSSTSESPAPSPGLQQQQNNSHHSTNATSTTTTTSSTLSKSAMNNQNNNNNNNP
LSANNINSNNSTEFSFITNSVTSNHNSTPTSVTNQSSPSNNNTNNNNNKTTATTAVWSSS
TATVKTILSNNNITSTTQSVTTPYAAAVASSVTGSGTSLSSSSSSSTTKTSSSVTTVTND
SNVQQSNDSSSMNNNNSSTSTVVTLYSAAAAAASTITSAPSAVVSNNTNPNQTNPWNASN
LAAIVSNNTNSANNSQQQQQQPPIQLTSQQQQYLLQNNHLINGYKGIANVENLKGLAAAA
AVAQGMLTPSVTNAASSGLDSDLLSGDTPQANALLSPALIANAGGQSAVLNNKLSAAHLN
DLGPNQPNANQQQQSFQHLDHLNHANILKNNLMMHQRQMQAVNVPVSSVSPPSNMATIVN
QQSKQPPPVPQPPNQSNISQQQVDVTKNANIQNQLNNLVNQQQQQQQTQPNQPPQSQNFY
SSTMLSSQPNKPTISKQTLFHMHLLDAAFRQPIIPIDSYRLRPLHIKLPQLHTYSQMSSF
PNQTLSQFNNIEFYDRLTPETLFFIFYYMEGSKAQYMAAKTLKNKSWRFHTKYMMWFQRL
EEPKLITDDYEQGTYIYFDFEKWTQRKKENFVFEYKFLEDKELN
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaagaaaattactagctgaaattgatagatgtttgaaaaaagtaaatgaa
ggtgttgaaacatttgatgagatatgggttaaagttcataatgcaaccaatgctaatcaa
aaagaaaaatatgaagctgatctcaaaaaagagattaaaaaattacagagacaacgtgat
caaataaaaacatggttagcatccagcgaggttaaagataaaagagaactaagtaattat
cggcgattaatcgaaatgcaaatggaacgttttaaagtggttgaacgtgaaaccaaaact
aaagcctattcaaaagaaggattaggtgcagcacagaaattagatccggcacaaaaagaa
aaagatgacatcactaattggctatcgaattcgattgaaaagttatccgaacaagtagaa
ttatttgaaagtgagctagaaaatctacaaacaacacagaaaaaaggtaaaaaagatcgc
gaaaaacaggaacggcatgatttcgtcaagaatcgtgtggaaaaacatcgttatcatata
aaacaactggaaacattaatgcgaatgttagataatgaaacggtcgaagtggatcaaatc
aaaaaaattaaagatgatatcgaatattatattgaatcatcacaagatgctgaatttcaa
gataatgaatatatttatgatgatctagaccttgaagatatgcaagcattccgagcaaat
aatgtggtcgatttgacaaatgtgctcggtaatgctgcaggtaaaaatgaaaaaggatca
gcaacaaaaacaaatgataattcgacaacgtcatctacggcgaataataatacgacaacg
gctaatgtatcaatggaaaatgttgattgcaattcactaccagagagtaataataataac
caaaatgcctattcaaattcatcgtctacaagtgaatcgccagcaccaagtcctggtctt
caacaacaacaaaataatagtcatcattccactaatgcgacatcaacgacaacaacgaca
tcatcaacattgtcgaaatcggcaatgaataatcagaacaacaacaataataataatcca
ttatcagcaaacaatattaatagtaataattcaacagaattttcattcattacgaatagt
gtaacatcaaatcacaatagtacaccaacgtccgtaacgaatcaatcgtctccaagtaat
aataatactaataataataataataagactacagcaacaacagccgtttggtctagttcg
accgctactgtaaaaactattctaagcaacaacaacattacttccacaacgcaatcagtt
acaacaccgtatgccgccgcagttgcctcatcagttaccggttctggcacatcattatca
tcatcatcatcatcgtcaactacaaaaacatcatcttcggtcacaacggtaacaaatgat
tcgaatgtacagcaatcgaatgattcatcatcaatgaacaacaataattcatcaacatcg
acagtggtaacattgtatagtgcagcagcggccgccgcatcaacgataacgtctgcgcca
tccgctgttgtaagtaataacacgaatcctaatcaaacaaatccatggaatgcatccaat
cttgcggcaatcgtttcgaataatacaaactcggccaataattctcaacaacaacaacaa
cagcctccaattcaattgacatctcaacaacaacaatatttgctacaaaataatcactta
ataaatggttataagggaatagcaaatgttgaaaatcttaaaggtttagcagcagcagct
gccgtagcgcaaggaatgttaacaccatcggtgacgaatgctgcatctagtggtctagat
agtgatctattaagcggtgatacgccacaagcaaatgcgttattatctccagcattgatc
gctaatgccgggggacaaagtgccgttcttaataataaactgtcagctgctcatctgaat
gatctaggtccgaatcaaccgaatgcgaatcaacaacaacaatcatttcaacatcttgac
catcttaatcatgcgaatatattgaaaaataatttgatgatgcatcaacgacaaatgcaa
gcagttaatgtgccagtttcatctgtttcacctccaagtaatatggcaacaatcgttaat
caacaaagcaaacaaccaccaccagtaccacagccgccgaatcaatcgaacatatcacag
caacaagtcgatgtgaccaaaaatgcaaatattcaaaatcagttgaataatcttgttaat
caacaacaacaacaacaacaaacacagccgaatcaaccaccacaatcgcaaaatttttat
tcatcgacaatgttgtcaagtcaaccaaacaagccaaccatttcaaagcaaacattgttt
catatgcatttacttgatgcagcgtttcgtcaacctattattccgatcgattcgtatcga
ttaagaccattacatataaaactaccacaactccatacatattcacaaatgtctagtttt
cctaatcaaacgttgtctcaattcaacaatattgaattctatgatcgcttaacacctgaa
acattatttttcatcttttattatatggagggttcaaaagcgcaatatatggcagctaaa
acgttgaagaataaatcctggcgttttcatacaaaatatatgatgtggtttcaaaggctt
gaggaaccaaaacttataaccgatgattatgaacagggaacctacatttattttgatttc
gaaaaatggacccaacgtaaaaaagaaaactttgtattcgaatacaaattccttgaagat
aaagaactgaattaa
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