Dermatophagoides pteronyssinus (European house dust mite): 113793676
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Entry
113793676 CDS
T05775
Name
(RefSeq) 5'-3' exoribonuclease 2-like
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03008
Ribosome biogenesis in eukaryotes
dpte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113793676
09123 Folding, sorting and degradation
03018 RNA degradation
113793676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpte03021
]
113793676
03019 Messenger RNA biogenesis [BR:
dpte03019
]
113793676
03009 Ribosome biogenesis [BR:
dpte03009
]
113793676
03016 Transfer RNA biogenesis [BR:
dpte03016
]
113793676
Transcription machinery [BR:
dpte03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113793676
Messenger RNA biogenesis [BR:
dpte03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
113793676
Ribosome biogenesis [BR:
dpte03009
]
Eukaryotic type
Pre-60S particles
RNases
113793676
Transfer RNA biogenesis [BR:
dpte03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
113793676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
113793676
NCBI-ProteinID:
XP_027199537
UniProt:
A0A6P6Y219
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MGVPAFFRWLSKKYPSIVVHCDDGVKGEYHFDNLYLDMNGIIHPCSHPENKPPPANEEEM
FLAIFEYVENIMKIVRPKKLVYMAVDGVAPRAKMNQQRSRRFRAAQESYEKLIQIQKVKD
DLLARGIEVPEKEDSAHFDSNVITPGTDFMINLSEALRSWINRKLSEDYDDQHSIWPKDL
MIILSDSSVPGEGEHKIMDYIRRQKADKNFDANLSHCLYGADADLIMLGLATHEPNFTIL
REEFKPNQPRPCDLCGQLGHELKDCTGQPKPEEEQIRPADTEFIYIRLNVLREYLEKECK
SNTSVQLNFERFIDDYVFLCFFVGNDFLPHLPSLEIRENAIDRLIKIYKYVMEAYPDAQD
MYLTKNGHVNKHRVQLILQELGEYEDEIFKQRQQNEQNFKERNKRRKLMQAEQDLRWLKP
EAVGQSERPEVFNNPREEAHKVRMAYKDQGSNSAKDKLEKMLIKPNDNSGESSLKRKRED
SDNDDSEPEDLVQLYNDGWKERYYKHKFGVELVDRISKQVADEYFRGLCWVMLYYYQGCP
DWKWFFPFHYACFASDFKNIEQIDIKFDRMAKPFKPLEQLMSVFPAASSKSLPPTWRELM
SRNDSPIIDFYPTTFKIDLNGKKAAWMGVALLPFIDEERLFAALKTVYNDLTDSEKRRNC
HGSHLIFTSKKHSILSDNIRNAIENGTSIENNDTDDDVNKNNEQKAIPAAESEPNLISGS
LRKSSNYSMTYSKTLCCEFYDPTYSKEFIFPAVMLKNARKPDTVLRPQDLDRFERYRPII
GMNRRSDRANLAGSGHRMIERLVQKEHGGEQYRNEQYHNQYGYQNYRHQQYNMQQYSTEN
RYYPDNNNNRYNRQQQDSNRYSGYNNHNHHSNPSRQQSNYSSSSYYSQQQQPSQQNQYST
GSYYQQQQQSSSSNYNSRYSTAPPPPQPQASGFSSYYTSDYVNHHQQPQQQHQQRRGGYG
NSSNRSYR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagcattttttcgatggttatcaaaaaaatatccatcaattgttgtacat
tgtgatgatggtgttaaaggtgaatatcatttcgataatctttatctcgatatgaatggt
attattcatccgtgtagtcatccggaaaataaaccaccaccagcaaatgaagaggaaatg
tttttagccatttttgaatatgttgaaaatataatgaaaattgttcgaccaaaaaaatta
gtatatatggctgttgatggtgttgcaccgcgtgccaaaatgaatcaacaacgatcacga
agatttcgtgctgcacaagaatcatatgaaaaattgattcaaattcaaaaggttaaagat
gatttattggctcgtggtatcgaagtaccggaaaaagaagattccgctcattttgattcg
aacgtcattacacctggtactgattttatgataaatctaagcgaagctttacgtagctgg
attaatcgtaaattaagtgaagattatgatgatcaacattcaatatggcctaaagatttg
atgattatcctaagtgattcatctgtgcctggtgaaggtgaacataaaattatggattat
attcgacgacaaaaagcggataaaaatttcgatgcaaatctttcgcattgtctttatggt
gccgatgctgatcttatcatgttgggtctggcaacacatgaaccaaattttacaattcta
cgtgaagaatttaaaccaaatcaaccacgaccatgtgatctatgtggtcaacttggtcat
gagttaaaagattgtaccggacaaccgaaacccgaagaagaacaaataagacctgctgat
acggaattcatctacattcgattgaatgttctacgagaatatcttgaaaaagaatgtaaa
tcgaatacaagtgttcaattgaatttcgaacgttttatcgatgattatgtttttctatgt
ttttttgttggtaatgatttcttaccacatttaccatcgttagaaattcgtgaaaatgca
attgatcgtctaataaaaatctataaatatgttatggaagcttatccagatgcacaagat
atgtatctaacaaaaaatggtcatgtcaataaacatcgtgtacaattaatattgcaagaa
ttgggtgaatatgaagatgaaatatttaaacaacgacaacaaaatgaacagaattttaag
gaaagaaataaacgacgaaaattaatgcaagctgaacaggatttacgatggttgaaacca
gaagctgttggacaatctgaacgtccagaagtgtttaataatccgagggaagaagctcac
aaagtgcgtatggcatataaagatcaaggttcgaattcagccaaagataaacttgaaaaa
atgttgatcaaaccaaatgataatagtggtgaatcatcgttgaaacgaaaacgtgaagat
tcagataatgatgatagtgaaccagaagatctggtacaattatataatgatggatggaaa
gaacgttattataaacataaatttggtgttgaattagtggatcgtattagtaaacaagtt
gcggatgaatattttagaggtctttgttgggttatgctttattattatcaaggttgtcct
gattggaaatggttttttccctttcattatgcatgttttgctagtgatttcaaaaatatc
gaacaaattgatattaaatttgatcgtatggctaaaccattcaaaccattagaacaattg
atgagtgtatttccagctgcatcatcaaaaagtttaccaccaacatggcgtgaactaatg
tcacgtaatgattcaccaatcattgatttctatccgacaacattcaaaatcgatttgaat
ggtaaaaaagctgcatggatgggtgttgcattgttaccattcattgatgaagaacgattg
tttgcagcattaaaaactgtttacaatgatcttaccgatagtgaaaaacgtcgtaattgt
catggatcacatttgatttttacatcgaaaaaacattcaatactttcagataatattcgt
aatgcaatcgaaaatggaacgtccattgaaaacaatgacactgatgatgatgtaaataaa
aataatgaacaaaaagccataccagctgctgaatcagaaccaaatttaatatctggttca
ttaagaaaaagttcaaactattcaatgacttattcaaagacattatgctgtgaattttat
gatccaacttattcgaaagaatttatatttccagcagtaatgttaaagaatgcacgaaaa
cctgacactgttcttcgtccacaagatcttgatcgatttgaacgttatcgtccaattatt
ggtatgaatagacgttcagatcgtgccaatttagctggtagtggtcatcgaatgattgaa
cgattagtacaaaaagaacatggtggtgaacaatatcgtaatgaacaatatcataatcaa
tatggttatcaaaattatcgtcatcaacaatataatatgcaacaatattcaactgaaaat
cgatattatcccgataataataataatcgatataatcgacaacagcaagatagtaatcga
tattctggttataataatcataatcatcattccaatccatctagacaacaatcaaattat
tcatcatcaagttattatagccaacaacaacaaccatcacaacagaatcaatatagcact
ggaagttattatcaacaacaacaacaatcatcatcatcgaattataatagtcgatattcg
acagcaccaccaccaccacaaccacaagcatcgggattctcatcttattatacaagcgat
tatgttaatcatcatcaacagccacaacaacaacatcaacaacgaagaggtggttatgga
aattcatccaatcgatcttatcgttga
DBGET
integrated database retrieval system
