Dermatophagoides pteronyssinus (European house dust mite): 113794393
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Entry
113794393 CDS
T05775
Name
(RefSeq) spliceosome RNA helicase DDX39B-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03013
Nucleocytoplasmic transport
dpte03015
mRNA surveillance pathway
dpte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113794393
09122 Translation
03013 Nucleocytoplasmic transport
113794393
03015 mRNA surveillance pathway
113794393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpte03019
]
113794393
03041 Spliceosome [BR:
dpte03041
]
113794393
Enzymes [BR:
dpte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113794393
Messenger RNA biogenesis [BR:
dpte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113794393
Spliceosome [BR:
dpte03041
]
Complex C
Other components
EJC/TREX
113794393
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113794393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
Dark_CARD
Motif
Other DBs
NCBI-GeneID:
113794393
NCBI-ProteinID:
XP_027200316
UniProt:
A0A6P6Y5N0
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MADNDNDLLDYEEDEEQAPIGGDLSNNQANNNGTVNDTKKAGYVSIHSSGFRDFLLKPEL
LRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDPVDGQISV
LVMCHTRELAFQISKEYERFSKYMPSIRVAVFFGGLTITNDEKVLRMNPPHIVVGTPGRI
LALIRNKKLNLKNIKHFILDECDKMLEQLDMRRDVQEIFKATPHEKQVMMFSATLSKDIR
PVCKKFMQDPMEVYVDETKLTLHGLQQYYVKLKDSEKNRKLFQILDDLEFNQVVIFVKSV
QRCVALATLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVN
IVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDESDAKVLNSVQDRFDVSIPEMPAD
IDVSTYFEDK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatgataatgatttgttagattatgaggaagatgaagaacaggcaccaatt
ggtggtgatctttccaataatcaggcaaataataatggtaccgtgaacgatacaaaaaaa
gctggctatgtttccatccattcgagtggttttcgtgatttcttattgaaacccgaatta
ttacgtgctattgttgattgtggttttgaacatcctagtgaggttcaacatgaatgtatt
ccacaagctatcctgggtatggacattctttgtcaagctaaatccggtatgggtaaaacg
gccgttttcgttttggccacattacaacaattggatccagttgatggacaaatttccgta
ttagtcatgtgtcatacacgtgaattagcatttcaaatctccaaagaatatgaacgtttc
tccaaatatatgcctagcatacgtgtggcagttttcttcggcggtctcaccattaccaat
gatgaaaaagttcttcgaatgaatccaccacatatcgttgttggtactccgggtcgaatt
ttggcactgattcgtaacaaaaaactgaacctgaaaaatatcaaacatttcattcttgat
gaatgcgataaaatgcttgaacagcttgacatgcgacgagatgttcaagaaatattcaaa
gctactcctcatgaaaaacaagtcatgatgtttagtgctacattgtcaaaggatattcga
ccagtctgcaaaaaatttatgcaagatccaatggaagtatacgtggatgaaacaaaactc
acattacatggcctacaacaatattacgtcaaacttaaagattcggaaaagaatcgaaaa
ttgtttcaaatacttgatgatttagaatttaatcaggtggtcattttcgttaaaagtgta
caacggtgtgttgctttggcaactttattggtcgaacaaaatttcccagctattgctatt
catcgtgctatgactcaagaggaacgattatcacgttatcaacaatttaaagatttccag
aaacgtatattggtcgctactaatctatttggtcgtggtatggatattgaacgtgttaat
atcgtattcaattacgatatgcccgaagatagtgacacttatctacatcgtgttgctcgt
gccggtcgttttggaacgaaaggtttagctatcacgtttgtaagcgatgaaagtgatgca
aaagtgttgaatagtgttcaagatcgttttgatgtttcaattccagaaatgcctgccgat
attgacgtgtctacctatttcgaagacaaatga
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