Dermatophagoides pteronyssinus (European house dust mite): 113795338
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Entry
113795338 CDS
T05775
Name
(RefSeq) uncharacterized helicase C17H9.02-like
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113795338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpte03019
]
113795338
03041 Spliceosome [BR:
dpte03041
]
113795338
03009 Ribosome biogenesis [BR:
dpte03009
]
113795338
03016 Transfer RNA biogenesis [BR:
dpte03016
]
113795338
Enzymes [BR:
dpte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113795338
Messenger RNA biogenesis [BR:
dpte03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113795338
Spliceosome [BR:
dpte03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113795338
Complex C
U4/U6.U5 tri-SnRNP related factors
113795338
Ribosome biogenesis [BR:
dpte03009
]
Eukaryotic type
Pre-60S particles
Helicases
113795338
Transfer RNA biogenesis [BR:
dpte03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113795338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DEXQc_Suv3
ResIII
MTR4-like_stalk
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113795338
NCBI-ProteinID:
XP_027201334
UniProt:
A0A6P6Y9S8
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MTPSYEVKTFSSPASDEKCSFCEHYRVQPRNYVAPAPRSKSACITFSYKLDEFQRIACEC
VDKLENVLVSAHTSAGKSTVALYAIQAAVDDNAKVVYTSPIKALSNQKFRDISEAYPDKV
GLLTGDVCFNPAAQILIVTTEILRSMLFRGSAMMRELKWVIFDEVHYMRDRDRGVIWEEA
IVLLPNSVNMIFLSATIPNSLEFASWICETKTRACNVVSTSFRPTPLCHYLFSDHASDFQ
LVKGKDCVVLRPAIESALAAVANSADLALDGAAKRARPRVGSAEHSLLGRVVAQCIKKKL
LPVIVFAFSRREVQANAQLFGDFDLTDADEKAQIKEVFDNALATLSAEDRRVQQFAEQAD
LLVRGFGMHHGGLIPLLKEVTEILFEAGMIRVLFSTETFSMGLNMPARSVVFTNLRKYDG
ETTRMIAPSEYIQMSGRAGRRGLDPQGHSIVLLDFPYEAEQIANLLDGQPDPLDSRFHLM
FSTVLNLLRVQGITPRYIIRRSFYAFQNQNKLALLLEQRDALQRKVERLTVPS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacgccctcgtacgaggtgaaaactttttcaagccctgcgagcgacgaaaaatgtagt
ttctgtgagcattaccgcgttcagccgcgaaactacgtggcgccggcgccgcgctctaag
tcggcttgcataacgttttcctacaaattggacgagttccagcgcatcgcgtgcgagtgc
gtagacaaactcgagaacgtcttggtctccgcgcacacgtccgccggaaagtcgacggtg
gcgctctacgccattcaagctgcagtcgacgacaacgcaaaagtcgtctacaccagcccc
atcaaggcgctgtcgaaccaaaagtttcgcgacattagcgaagcgtaccccgacaaggtc
ggcttgctcaccggcgacgtttgcttcaacccggctgcgcaaatcttgattgtcactacc
gaaattctgcgctccatgctgtttcgcggttccgccatgatgcgcgaactcaagtgggtc
attttcgacgaagtgcactacatgcgcgaccgcgaccgcggcgtgatttgggaggaggcg
attgtgctgctgccgaattccgtcaacatgattttcctctccgccacgatcccgaactcg
ctcgagtttgcctcttggatttgcgagacgaagactcgcgcctgcaacgtggtcagcacc
tctttccgcccgacgccgctctgccactacctcttcagcgaccacgcttccgactttcag
ctggtcaagggcaaggactgcgtcgtgctgagacccgcgatcgagagcgcgctcgctgcc
gtcgccaattcggcggacctcgcgctcgacggtgccgcaaagcgcgcgcgcccgcgcgtc
ggctcggccgagcactcgctgctcgggcgcgtggtggcgcagtgcatcaagaaaaagctg
ctgccggtgattgtcttcgcgttctcgcggcgagaagtgcaggccaacgcgcagctcttc
ggcgacttcgatttgaccgatgcagacgagaaggcgcagattaaggaagtcttcgacaac
gcgctcgccacgctttccgcggaagaccgccgcgtgcagcagttcgctgagcaggcggat
ctgctcgtgcgcggcttcggcatgcaccacggcggcctcattccgctgctcaaagaagtc
actgagattctgttcgaggcgggcatgatccgcgtgctgttcagcaccgagacgtttagc
atgggtctgaacatgcccgcgcgctccgtcgtgttcaccaacctgcgcaagtacgacggc
gagaccacgcgcatgattgcgccgtcggagtacatccaaatgagcggccgcgccggccgc
cgcggcctcgacccgcagggccacagcatcgtgctgctcgacttcccgtacgaagcggag
caaattgccaacttgctcgacggccagccggacccgctcgacagtcgctttcacttaatg
tttagcaccgtgctcaacttgctgcgcgttcaaggcatcactccgcgctacatcattcgc
cgctctttttacgcgttccaaaaccagaacaagctcgcgctgctgctcgagcagcgcgac
gcactgcagcgcaaagttgagcggctcaccgtgccctcgtag
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