KEGG   Dermatophagoides pteronyssinus (European house dust mite): 113796161
Entry
113796161         CDS       T05775                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
dpte  Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03030  DNA replication
dpte03410  Base excision repair
dpte03420  Nucleotide excision repair
dpte03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpte00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113796161
   03410 Base excision repair
    113796161
   03420 Nucleotide excision repair
    113796161
   03430 Mismatch repair
    113796161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpte03032]
    113796161
   03036 Chromosome and associated proteins [BR:dpte03036]
    113796161
   03400 DNA repair and recombination proteins [BR:dpte03400]
    113796161
DNA replication proteins [BR:dpte03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113796161
  DNA Replication Termination Factors
   ELG1-RFC complex
    113796161
Chromosome and associated proteins [BR:dpte03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    113796161
DNA repair and recombination proteins [BR:dpte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113796161
  Check point factors
   HRAD17(Rad24)-RFC complex
    113796161
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid AAA_2 AAA_5 AAA_22 IstB_IS21 AAA_30 AAA_assoc_2 AAA_14 DEAD AAA_19 nSTAND3 AAA_25 Mg_chelatase AAA_18 AAA_24 ResIII MetRS-N AAA_28 AAA_RNF213_4 DNAX_ATPase_lid TIP49 SLFN-g3_helicase RuvB_N RNA_helicase AAA_7 AAA_11 DO-GTPase1 AAA_33 AAA_23
Other DBs
NCBI-GeneID: 113796161
NCBI-ProteinID: XP_027202201
LinkDB
Position
Unknown
AA seq 200 aa
MSTLANNSCVNFLFFGPPGSGKTSAALALAKSMFGNDWKKNTLELNASDDRGISAVRTRI
KPWSQYVSKQDENSDETQRMSKLIILDEADMMTFDAQAALRRVIEDYNGKSSFIIICNYL
NKIIEPIISRCVVCKFNPISLTDHISHLNSICAAEGVNVDSDKLKLIVTLTNGDIRASMN
LLQCAHAIYGNNVSNVCSKR
NT seq 603 nt   +upstreamnt  +downstreamnt
atgtcaacgcttgcaaacaatagttgtgtgaattttttatttttcggtcccccggggtct
ggaaaaacttcagccgccttagctctagcaaaatccatgtttggaaatgattggaaaaaa
aacactttagagttgaatgcgtcagatgatcgtggaatttctgctgtacgtacaagaata
aagccttggagccagtacgtctccaaacaagatgagaattctgacgaaactcagcgaatg
tctaaactgatcatactagatgaagcggatatgatgacattcgacgctcaagctgcgttg
cgcagagtgattgaagattacaatggcaaaagcagtttcataataatttgtaactactta
aataaaataatcgaacctattatttcgagatgtgttgtatgtaagtttaacccaatatcg
ctaactgatcatatttcgcacttaaacagcatttgcgctgctgaaggcgtaaatgtcgac
tcagataaattaaaattaattgttaccttaactaatggagacataagagcttcgatgaat
ttgttacagtgcgcacatgcaatttatggaaacaacgttagtaatgtatgttcaaaacga
taa

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