Dermatophagoides pteronyssinus (European house dust mite): 113796902
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Entry
113796902 CDS
T05775
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113796902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpte03019
]
113796902
Enzymes [BR:
dpte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113796902
Messenger RNA biogenesis [BR:
dpte03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113796902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_NFXL1
RRM_1
DUF3439
Motif
Other DBs
NCBI-GeneID:
113796902
NCBI-ProteinID:
XP_027202998
UniProt:
A0A6P6YC40
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MDITKRNFVENIEQIDEQISDCDFVSIDCEFSGLFQNQRRNNELDNYEQLYLNTRTNINQ
FQIFQFGLSLFKKLPDDYIYDCYSYNFYIFPTKCIFLPEEQRERCFLCQSSSLTFLVDNG
FDFNRMIRDGITYIPLNQLTTVETKINAKIQENQLKTNFIEIEKDEDKKFLEELNEKLNK
FMSNDEQQEEILPQCNSYYRRIIYETIQKSSFKDSIQISTGKQDNKGSLILKKGTPKPKD
EQAKSLLFDNIGFTLIIKSLIKHQKPIIGHSLFFDLLHIYNLFIEPLPEKYDEFKLSIKS
LFNSIYDTAYISLSPKLKNYFPQNALKKVFETVKNEPFLGTKFSLKNSSNFDDDNRYHEA
GYDSFITGCCFVQMIRYLCEQENLEEENLLNNKISNEFRNKISIFGNYDIKFLNLQGNDE
PLNRNHIFHLNFSKSFTRNDLNGIFSEFGGLYRIVFLDDESAFCIMKDENKIGDAIEALI
INPKGYRYAFKIQHYSEFIKQQKAINNHNRDNSSPQMSKQTPKSSAKLKQHHTPTTTTTT
TPEPIIDECLVNKKIKLNTTSTNIVGGGEKNNHSSSQLVEKLFDDNMSWTNDCH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatattacaaaacgaaattttgtcgaaaatattgaacaaattgatgaacaaatttcc
gattgtgatttcgtttcaattgattgtgaatttagtggtttatttcaaaatcaacgacgt
aataatgaattagataattatgaacaactttatctgaatacacgaacgaatataaatcaa
tttcaaatatttcaatttggattatcattgtttaaaaaattacccgatgattatatttat
gattgttattcatataatttttatatttttccaaccaaatgtatttttttacctgaagaa
caacgtgaacgatgttttctttgtcaatcatcatcgttaacatttcttgttgataatggt
tttgattttaaccgaatgattcgtgatggtattacatacattccattgaatcaattgaca
acagttgaaacaaaaatcaatgcaaaaattcaagaaaatcaattgaaaacaaattttatt
gaaattgaaaaagatgaagataaaaaattccttgaagaattgaatgaaaaattaaataaa
tttatgtctaacgatgaacaacaagaagaaatattaccacaatgtaattcatattatcga
agaattatttatgaaactatacaaaaatcatcatttaaagattcgattcaaatttccacc
gggaaacaagataataaaggttctttgatattgaaaaaaggtacaccgaaaccaaaagat
gaacaagcaaaatcattattatttgataatattggttttacattgattataaaatcattg
attaaacatcaaaaaccaattattggtcatagtttattttttgatttattacatatttat
aatttatttattgaaccattaccggaaaaatatgatgaatttaaattatcaatcaaaagt
ttgttcaattcaatatatgatacggcctatatttcattgagtccaaaattgaaaaattat
ttcccacaaaatgcattgaaaaaagtattcgaaacggtaaaaaatgaaccatttttagga
acaaaattttcattaaaaaattcatcaaattttgatgatgataatcgttatcatgaagct
ggttatgattcatttataactggttgttgttttgtacaaatgatacgttatctttgtgag
caggaaaatttagaagaagaaaatctacttaacaataagatttcgaatgaatttcgaaac
aagatttctatatttggaaattatgatataaaattcctgaatctacaaggcaatgatgaa
ccattaaatcgtaatcatatttttcatttaaatttttcaaaatcatttacacgtaatgat
ttgaatggaatattttcggaatttggtggtttatatcgtattgtttttttggatgatgaa
tcagcattttgtataatgaaagatgaaaataaaattggtgatgctattgaagcattgatt
ataaatccaaaaggttatcgttatgcatttaaaattcaacattattcagaatttatcaaa
caacaaaaagcaatcaacaatcataatagagataatagcagtccacaaatgtcgaaacaa
acaccgaaatcatcagctaaattgaagcaacatcatacaccgacaacaacaacaacaaca
acaccggaaccgataatcgatgaatgtttagtaaacaaaaaaatcaagttgaatacaaca
tcaacgaatattgttggtggtggtgaaaaaaataatcattcatcatcacaattggttgaa
aaattatttgatgataatatgtcatggacgaatgattgtcattga
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