Deinococcus puniceus: SU48_02520
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Entry
SU48_02520 CDS
T04339
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dpu
Deinococcus puniceus
Pathway
dpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SU48_02520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpu03019
]
SU48_02520
03016 Transfer RNA biogenesis [BR:
dpu03016
]
SU48_02520
Enzymes [BR:
dpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SU48_02520
Messenger RNA biogenesis [BR:
dpu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SU48_02520
Transfer RNA biogenesis [BR:
dpu03016
]
Prokaryotic type
tRNA degradation factors
SU48_02520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ANE42820
UniProt:
A0A172T757
LinkDB
All DBs
Position
complement(544750..546915)
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AA seq
721 aa
AA seq
DB search
MIGKTFTTMLGGRELSIETGKLAKLVSGSVTLRYGDTMLLVTAQAREEKSPLDFLPLTVE
FEERHYAVGKIPGSFHRREGRPGEKAILGARITDRQIRPLFPKGYRHETQVIITVISADQ
QNLPDVLGPIGASAALSISDIPWGGPTACVRVGQVDGQYVLNPTTEQLNRSVLDLVVAGT
RDAVMMVEAGAQTVSEELIVGAIEFAHAEMQGVISLIETMRAELGQEKFNILAEGDLTPD
LVPELAAAARSSGLRDALLTTKKKERSANLKALRDRLIAAQIPEGEMDAAEARIAALKTA
FGKVEKQELRRLILEEDMRADGRNSKTVRPIWIETRSLPRAHGSAIFTRGETQVLGIATL
GTERDNLLVDDLTLDDNDKFLLHYNFPPYSTGEVKRMGGQSRREIGHGNLAKRAIRAVLP
TFEEFPYVIRVVGEVLESNGSSSMATVCAGTLALMDAGVPLKAPVAGVAMGLVIEGDKYR
ILTDILGLEDALGDMDFKVCGSEHGITALQMDIKVGGITPAIMREALEQARVGRLHILGK
MAEVLAAPRAELAPTAPRIVTIKINPELIGKVIGPGGKQIRELEALGAQITLEEDGTVRI
FSADGAAAEAVKARIEGLTRTAKIGEEFEGTVVKTAAFGAFINLFPGQDGMLHISQMSEE
RVNAVEDVLNVGDKLRVKIVNVDDRGKIDLVRPELEGKIAPRAPREARPGGDRGGRPPRR
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgattggaaaaacgtttacaacgatgctgggtggccgcgaactgagcatcgagacgggc
aaactggccaaactggtcagcggcagcgtgaccctgcgctacggcgacacgatgttgctg
gtcaccgcgcaggcccgcgaagaaaagagtccactggatttcctgcctctgacggtggaa
tttgaagaaaggcattacgcggtaggcaagattcccggatcgtttcaccgccgcgaggga
cgccccggcgagaaggccatcttgggcgcacgcattacagaccgccagattcggcccctc
tttcccaagggctaccgccacgaaacgcaggtcatcatcaccgtgatcagcgccgatcag
cagaacctgcccgacgtgctggggccaatcggcgcttcggcggccctcagcatcagcgat
attccttggggcggccccactgcctgcgtgcgcgtgggccaagtggacggccaatacgtg
ctgaaccccaccaccgagcaactgaaccgttcggtactcgacctcgtggtggccggaacc
cgcgacgccgtgatgatggtggaagcgggcgcacaaacggtcagtgaggaactgatcgtg
ggggccatcgagtttgcccacgccgagatgcaaggcgtgatttcgctgatcgaaaccatg
cgggccgaactgggccaagaaaaattcaacattttggccgaaggcgacctgacccccgac
ctcgtgccggaactggccgccgccgcccgcagctctggcctgcgcgacgccctgctgacc
accaaaaagaaggaacgcagcgcgaatctgaaggcgctccgtgaccgcttgattgccgcc
cagattcctgagggagagatggacgccgccgaagcccgaattgctgccctaaaaaccgcg
tttggcaaggtagaaaagcaggaactccgccgcctgattctggaagaagacatgcgggcc
gatggacgcaactctaagaccgtgcgccccatctggatcgaaacccgcagcctgccccgc
gctcacggcagcgccatttttacccgtggagaaacccaagtgctgggtatcgccacgctg
ggcaccgaacgcgacaacctgctggtagacgacctcacgctggacgacaacgataaattc
ctgttgcactacaatttcccgccgtactccacaggtgaagtgaagcgcatgggcgggcag
tctcgccgcgaaatcgggcacggcaaccttgccaaacgggccattcgcgccgtgctgccc
actttcgaagaattcccctacgtgatccgcgtggtgggcgaagtgctggaatcgaacggc
agctccagtatggccaccgtttgcgccggaaccttggcgctgatggacgcgggcgtgccg
ctgaaggctccagtagcgggtgtggcgatgggtctggtcatcgaaggcgacaagtaccgc
atcctcaccgatattttggggctggaagacgccttgggcgacatggatttcaaggtgtgc
ggcagcgaacacggcatcacggcgctgcaaatggacatcaaggtgggcggcattaccccc
gccatcatgcgtgaggcgctggagcaagcccgcgtgggccgcctgcacatcctcggcaaa
atggccgaagtgctggccgcgccccgcgcagaactggctcccaccgcgccgcgcatcgtg
accatcaagatcaatcccgaactgatcggcaaagtgatcggcccgggcggcaagcagatt
cgggaactggaggccctcggcgcacagattacgctggaagaagacggcacggtacgcatt
ttcagtgccgatggagccgctgccgaagccgtgaaagcccgaatcgaaggcctgacccgc
acggccaagattggggaagaatttgaaggcactgtcgtcaagaccgccgctttcggggcc
ttcatcaatttgttccccggtcaggacggcatgctgcacatcagccagatgtccgaggag
cgcgtaaacgctgtagaagacgtgctgaacgtgggcgacaagctgcgcgtgaagatcgtg
aacgtggatgaccggggcaaaatagacctcgtgcgccccgaactggaaggcaaaatcgcc
ccccgtgcgccgcgtgaagcccgtccgggtggagaccggggcggacggccacctcgccgt
gactga
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