Deinococcus puniceus: SU48_03560
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Entry
SU48_03560 CDS
T04339
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dpu
Deinococcus puniceus
Pathway
dpu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SU48_03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpu03021
]
SU48_03560
03400 DNA repair and recombination proteins [BR:
dpu03400
]
SU48_03560
Enzymes [BR:
dpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SU48_03560
Transcription machinery [BR:
dpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SU48_03560
DNA repair and recombination proteins [BR:
dpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SU48_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RPOC_hybrid
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANE43002
UniProt:
A0A172T7S6
LinkDB
All DBs
Position
776220..780866
Genome browser
AA seq
1548 aa
AA seq
DB search
MKDFSKVRIAIASPAKIREWSFGEVEKPETINYRTLKPEREGLFDERIFGPIKDYECACG
KYKRQRYEGKVCERCGVEVTSSKVRRYRMGHIDLATPAAHIWYVKDTPSKIGTLLDLSAG
QLEKVLYFSSFLVTQPLNAQKDGRPLKRGELLTDDEYRELRFGRQETYAIPGGQEAVIRD
GEYVTRGQILGGNVVAKMDGLAQYRFPRRAEIAYSEEVEASLPLPADVLVEQDAFRAGEI
LAELEADITITAPVDGTAFLHDLGEDSVMVDIRASVDAPEPSEDEEEEVAAAPLGEVLAR
VYLPHGMNVQVAQGEIVEAGATLADASAGSRLRVSRDSRLSAVTFPKKKGDVTVTAHWMR
RAEYPINPTMHVLVGDGSEVKKGQKVVGAIDKEEEIIAEAAGVITLHAPASVIVSKAKVY
PYNDEPLVVIGDRVEPGDELADSGNLRSEISGRIEIDLVRKQVRVIESYDFEAKMGAEAV
KELLDELDLDILEAELGEMMKDSSRHKRAKARKRLEVTRAFKRSGNHPSWMILNTVPVMP
PDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLIGQGAPDMIIRNEKRMLQEAVDAL
IDNGRRGSPVTNPGSDRSLRSLTDLLGGKQGRFRQNLLGKRVDYSGRSVIVVGPQLRLHQ
CGVPKRMALELFKPFLFKVLEEKGEVTNIKQARKMLERYRDTRDSVWDALEEVIEDKVVL
LNRAPTLHRLGIQAFEPVLVEGQSIQLHPLVCEAFNADFDGDQMAIHVPLSAQAQAEARI
QMLSSHNLLSPANGEPNVKPSRDIILGIFTLTQLRRDIPGAGTEYGSEQDVLAAFDSGIL
SLNSPVMLRGKETSPGRLRYVFSSPDEAIMAVERGTIDNQDHVLIRLNGKMYETSAGRVS
FRRIVQEALGNQASLVDTLVDLDTTYEKDALKDMVMACFKHLGIEATAGLLDGLKDSGFK
LSTTSGITIGIDDIVLPPSKPALLAAADLKLKEIEQNYEFGFMTHEERYKQVVQLWNDTT
DEVKNAVFENFSQNYPFNPLWIMSQSGARGNPQQIRQLAGMRGLMARPDGSTIEVPIKAS
FREGLTVAEYFISTHGARKGGADTALRTADSGYLTRKLVDVAHEVVVRDVDCGSTDYTEI
FLGATDDRTGEWRSRKASEIETSIYGRTLTADVTLEDGRVVPSGEMLNLEDVKLIAKQAR
ALESVYVRTPLNCRVKAGVCQKCYGYDLSQAKPVSMGEAVGVVAAESIGEPGTQLTMRTF
HTGGVAGGGDITMGLPRVIELFEARKPKTQAVVADRDGLVRIEEEEERYMIKIEADDDQY
SAKTATKVPKTLRLIVKDGDRVEAGQAMTRGAVNPHDLLLYKDSGAAQHYLVEEVQRVYR
SQGVKVHDKHIEIIVRQMLRWVEVIDGGSTELLEGQTVERWEVDQANDALTEGQTPSSWK
PVLLGITKSSLTTKSWLSAASFQHTTHVLTEASMKGQVDELIGLKENVILGKLIPAGTGL
RTVREMQVADERTLEKYGEGSVSPDAVTGTQRYDDTRPTSTPTISFNG
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttcagcaaggtacgcattgccatcgccagccccgcgaagattcgggaatgg
agctttggcgaagtcgaaaagcccgaaaccatcaactaccgcaccctcaagcccgaacgc
gaaggtctgttcgacgagcgaatctttgggccgatcaaggattacgagtgcgcctgcggg
aaatacaagcgccagcgttacgaaggcaaagtctgcgagcgttgcggtgtagaagtgacg
tccagcaaggtgcgccgctaccgcatgggccacatcgatctggcgacacccgccgcgcac
atctggtacgtgaaggacacgcccagcaagattggcaccctgcttgacctgagcgccgga
cagttggagaaagtgttgtacttcagctctttcctcgtgacccagcccctgaacgcccag
aaagacgggcggcccctgaagcgcggcgaactgctgaccgacgacgaataccgcgaactg
cgctttggccgtcaggaaacctacgccattcccggcggacaagaagccgtcatccgtgac
ggcgagtacgtgacgcgcggacagattctaggcggcaacgtggtcgccaagatggacggc
ctcgcccagtaccgcttccctcgccgcgccgaaatcgcgtacagcgaagaagtcgaagcc
tccttgcccctgcccgccgacgtgttggtagagcaagacgccttccgcgccggagaaatt
ctggccgaactggaagccgacatcaccatcacggctcctgtagacggcaccgccttcctg
cacgacctcggtgaagattcggtcatggtggacatccgcgccagcgtggacgcccccgaa
cccagtgaggacgaggaagaagaagtggccgccgcgccgctgggcgaagtgttggcccgt
gtgtacctgcctcacggcatgaacgtgcaggtcgcgcagggtgagattgtagaagcaggt
gccacgttggccgatgccagcgccggaagccgcctgcgcgtcagccgcgacagccgcctg
agcgccgtcaccttccccaagaagaagggcgacgtgacggtcacggcccactggatgcgc
cgcgccgagtacccgatcaaccccaccatgcacgtgctggtcggcgacggcagcgaagtc
aagaagggccagaaagtcgtcggcgcgattgacaaggaagaagagatcatagccgaggcc
gccggggtcatcaccctgcacgcgcccgccagtgtgatcgtcagcaaagccaaggtctac
ccctacaacgatgaacccctggtggtcatcggtgaccgcgtggaacccggcgacgagctg
gccgacagcggcaacctgcgctccgagatttcgggccgcatcgaaatcgatctcgttcgc
aagcaagtccgcgtgatcgagtcctacgatttcgaagccaagatgggcgcggaagccgtg
aaggaactgctggacgaactcgacctcgacattctggaagccgaactcggcgagatgatg
aaggattcgagccgtcacaagcgtgccaaggcccgtaaacggttggaagtcacccgtgcc
tttaagcgcagcggcaaccacccctcgtggatgatcctgaacacggttccggtgatgccg
ccagacctgcgcccgatggtgcaagtcgacggtggacgctttgctacgtccgacctgaac
gacctctaccgccgcctgatcaaccgcaacaaccgcctcaagaagctgatcggacagggc
gcacccgacatgatcatccgcaacgaaaagcggatgcttcaggaagccgtagacgccctg
atcgacaacggacggcgcggcagccccgtgaccaaccctggctctgaccgcagcctgcgc
tcgctgaccgatctgctcggcggcaagcagggacgcttccgtcagaacctcttgggcaag
cgcgtggactactcgggccgttcggtcatcgtggtcggcccgcaactccgcctgcaccag
tgcggtgtgcccaagcgcatggccctcgaactcttcaagcccttcttgtttaaggtgctg
gaagagaagggcgaagtgaccaacatcaagcaggcccgcaagatgctggagcgctaccgc
gacacccgcgacagcgtgtgggacgccctcgaagaagtgattgaagataaggtcgtgctg
cttaaccgtgcgccgacgcttcaccgcctcggcattcaggccttcgagcctgtgttggtg
gaaggccagtccatccaactgcacccgctcgtctgtgaagccttcaacgccgatttcgac
ggcgatcagatggcgattcacgtccccctgagcgcacaggcgcaggccgaagcccgcatt
cagatgctcagctcgcacaacctgctctcgcccgccaacggcgagccgaacgtgaagccc
agccgcgacatcatcctcggtattttcacgctgacccagcttcgccgcgatattcccggc
gcgggcaccgagtacggcagcgagcaagacgtgctggcggccttcgacagcggcattctg
agcctgaacagccccgtgatgctgcgcggcaaggaaaccagccccggacgcctgcgctac
gtgttctccagccctgatgaagccatcatggccgtcgagcgcggcaccatcgacaatcag
gatcacgtcctgattcgcctgaacggcaagatgtacgaaaccagcgcgggccgcgtcagc
ttccgccggatagtgcaggaggctctgggcaatcaggccagcctcgtcgatacgctggtg
gatctggataccacctacgaaaaagacgccctgaaagacatggtcatggcctgcttcaag
cacctcggcatcgaagcgacggcgggcctgctcgacggtctgaaagacagcggcttcaag
ctgtccacgacttcgggcatcaccatcggcatcgacgacatcgtgctgccgcccagcaag
cccgcgctgctggccgccgccgacctgaaactcaaggaaatcgagcagaactacgagttc
ggctttatgacccacgaggagcgctacaagcaggtcgtgcagctctggaacgacaccacc
gacgaagtgaagaacgcggtgttcgaaaacttctcgcagaactaccccttcaatcccctc
tggatcatgagccagtcgggtgcgcgtgggaatccccagcagattcgtcagttggcaggc
atgcgcggcttgatggcccgcccggacggcagcaccatcgaagtgccgatcaaggccagc
ttccgtgagggtctgacggtggccgagtacttcatcagcacgcacggtgcccgtaagggc
ggggccgataccgcgctgcgtaccgccgattccggttacctgacccgcaaactggtcgat
gtggcccacgaagtcgtggtacgtgacgtggactgcggaagcacggattacaccgaaatc
ttcctcggggccaccgatgaccgcaccggcgaatggcgttcgcgcaaggccagcgaaatc
gaaaccagcatctatggccgcaccctgaccgccgatgtgaccctcgaagatggccgcgtg
gtgccttccggcgaaatgctgaacctcgaagacgtgaagctgatcgccaagcaggcccgc
gctctggaaagcgtgtatgtccgtactcctctgaactgccgcgtgaaagctggcgtgtgc
cagaagtgctacggctacgatttgtctcaggccaagcccgtgagcatgggcgaagctgtg
ggcgtggtggccgcagagtctatcggcgaacccggcacccagctgacgatgcgtaccttc
cacaccggcggcgtggcaggcggcggcgacatcacgatgggtctgccccgcgtgattgag
ttgttcgaggcccgcaagcccaagacgcaggcggttgtggccgaccgtgacggcttggtg
cggatcgaggaagaagaagagcgctacatgatcaagatcgaagccgacgacgaccagtac
tcggccaagaccgcgaccaaagtgcccaagactctgcgcctgatcgtgaaggacggcgac
cgcgtggaagccggacaggccatgactcgcggcgcagtcaacccccacgacttgctgctc
tacaaagacagcggcgcggcgcagcactacctcgtggaagaagtgcagcgcgtgtaccgc
tctcagggcgtgaaggtgcacgacaagcacatcgaaatcatcgtgcggcaaatgctgcgc
tgggtcgaagtcatcgacggcggttctaccgaactgctcgaaggccaaactgtggagcgt
tgggaagtcgatcaggccaacgacgccctcaccgaaggccagacccccagctcgtggaag
cccgtgctgctcggcatcaccaagagcagcctgaccaccaagtcgtggctcagcgccgcc
agcttccagcacaccacccacgtcctcaccgaagcctccatgaagggtcaggtcgacgaa
ctgatcggcctgaaggaaaacgtgatcttgggcaaactgattcccgccggaacgggcctc
cgtaccgtgcgcgaaatgcaggtggccgacgagcgcacgctggaaaaatacggcgaaggc
agcgtcagccccgacgccgtcaccggaacccagcgttacgacgacactcgccccaccagc
acgccgaccatcagcttcaacggctaa
DBGET
integrated database retrieval system
