Dryobates pubescens (Downy woodpecker): 104296178
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Entry
104296178 CDS
T08526
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104296178 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104296178 (NUP54)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104296178 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104296178
NCBI-ProteinID:
XP_009894266
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MGKCCGFSFLXPAFSPALMLPCSFSASHLSGFGGLETANSTASGFNFGGFGLAANPAVNF
NIGNFGVSTTSTPPFNFGNTLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTGGLFGGTQN
KGFGFGTSFGTGTGTGLGSGLGTGLGFGGFGTQQQQTTLGSSLFSQPAQTPAQSNQLINT
ASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSL
IPNNKDEDGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNVEGVKTLPDDQTEV
IIYVVERSPNGTSRRVPASTLHAHFEQANIKSSLQQLGVSFSMARTELSPAQAKQLLQNP
PAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKAQDQMTKQHQTRLDIISEDISE
LQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCE
LNAPTQFKGRLNELMSQIRMQNHFGTVRAEERYYVDADLLREIKQHLKQQQEGLSHLISI
IKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatgttgtggcttttctttcctgnaccctgccttctccccagcactaatgtta
ccttgctctttttctgcttcccacttgtcaggatttggtgggctggaaactgcaaactcc
actgccagtgggtttaattttgggggttttggattagctgccaaccccgcagtgaatttt
aatattgggaatttcggtgtttccactacctcaactccaccattcaattttggtaacact
ctggcaagtgcaggtgcatttggaggatttgggacaaccaccacgactgcagcaccagcc
tttagcttttctgctcccaccaacacaggcaccggtggactttttggtggtactcagaac
aaaggctttggatttggtactagttttggcacaggaactggaactggcttgggtagtggt
ttgggaactgggctgggctttggaggcttcggtacccagcagcagcagacgacactagga
agcagcttgttcagccagcctgctcagacacctgcccagtccaaccagctcatcaataca
gctagtgccctctcggctcccacactcctgggagatgagagagatgcaattttggctaag
tggaaccagcttcaggccttctggggaacaggcaaaggctacttcaacaacaacatcgct
cccgtggagttcacgcaggaaaaccccttctgcaggtttaaggctgtgggttacagctta
atccccaacaacaaggatgaagatggcctcgtggtcttggtcttcaacagaaaagaagca
gatatccgaagccagcagcagcagctggtagagtcactacacaaaatcctgggaggaaac
cagaccctgactgtcaacgtggaaggtgtcaaaactttgccggatgaccagacagaagtg
atcatttacgtggtcgagcgctcgcccaacggcacctcaaggagagtccctgcatccacc
ctccatgcccactttgagcaggccaacatcaaatcatccctgcagcagctgggggtcagc
ttctccatggccaggacagagctttccccagcacaggccaagcagctcctgcagaaccct
cctgctggtgttgatcctattatatgggaacaagccaaagttgataatcctgatcctgac
aagctgattcctgtgccaatggtgggtttcaaggaactgttaagaagattgaaggcccag
gatcagatgaccaagcagcatcaaactcgattagatataatatcagaagatatcagtgag
ctgcagaaaaaccaaacaacaacaatggcaaagattgcacagtacaagaggaagctgatg
gctctttctcacagaacattacaggtgttgataaagcaggagatccaaaggaaaagcggt
tatgccattcaagctgatgaagagcaacttcgtgtacagctggacaccattcagtgtgaa
cttaatgcacctactcagttcaagggcaggctgaatgagctgatgtcccagatcaggatg
cagaaccactttggaacagtgcgggctgaggagcgctattacgtagatgcagacctctta
agggaaatcaagcaacatctgaagcagcagcaggaaggcttgagtcacctcattagcata
ataaaggatgacttggaggacatcaaacttatagaacatgggctgaacgagagcattccc
atcagaggaggagtcttcagctga
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integrated database retrieval system
