KEGG   Dryobates pubescens (Downy woodpecker): 104296453
Entry
104296453         CDS       T08526                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104296453 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpub03019]
    104296453 (EXOSC2)
Messenger RNA biogenesis [BR:dpub03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104296453 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104296453 (EXOSC2)
SSDB
Motif
Pfam: KH_6 RRP4_S1
Other DBs
NCBI-GeneID: 104296453
NCBI-ProteinID: XP_009894559
LinkDB
Position
Unknown
AA seq 188 aa
MVLLLSSMNLPGGELRRRSAEDELAMRDYLQEGDLISAEVQSVFSDGAVSLHTRSLKYGK
LGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWIYPTAEQKDEEAGGFTTNLEP
VPLSDREVISRLRNCVVALVTEKLMLFDTSILYCYEASLPHQIKDILKPEVMEEIVLETR
QRLLDVEG
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtcctgttgctgtcatctatgaatttacctggtggggaactgagaaggagatcagca
gaagatgagcttgcaatgagggactacctacaggaaggggacctcatcagtgcagaggtc
cagtctgtgttctctgacggagctgtctcgctgcacacccggagtctgaagtacggcaag
ctgggccagggtgtgctcgtccaggtctcgccctcccttgtgaagcgccagaagactcac
ttccacgacctgccctgtggtgcctctgtgatcctgggcaacaatggcttcatctggatc
tacccaaccgcagagcagaaggatgaagaggccgggggcttcaccaccaacttggagccg
gttcccctgtctgaccgggaggtgatctcgcggctgcgcaactgcgtcgtggctctggtc
acggagaagctgatgctgtttgacaccagcatcctgtactgctatgaagcatccctccct
catcagatcaaggacattctcaaaccagaggtgatggaggagatcgttctggaaacccga
cagaggctgctggatgtggagggatag

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