Dryobates pubescens (Downy woodpecker): 104296453
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Entry
104296453 CDS
T08526
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104296453 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104296453 (EXOSC2)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104296453 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104296453 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_6
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
104296453
NCBI-ProteinID:
XP_009894559
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
MVLLLSSMNLPGGELRRRSAEDELAMRDYLQEGDLISAEVQSVFSDGAVSLHTRSLKYGK
LGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWIYPTAEQKDEEAGGFTTNLEP
VPLSDREVISRLRNCVVALVTEKLMLFDTSILYCYEASLPHQIKDILKPEVMEEIVLETR
QRLLDVEG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgttgctgtcatctatgaatttacctggtggggaactgagaaggagatcagca
gaagatgagcttgcaatgagggactacctacaggaaggggacctcatcagtgcagaggtc
cagtctgtgttctctgacggagctgtctcgctgcacacccggagtctgaagtacggcaag
ctgggccagggtgtgctcgtccaggtctcgccctcccttgtgaagcgccagaagactcac
ttccacgacctgccctgtggtgcctctgtgatcctgggcaacaatggcttcatctggatc
tacccaaccgcagagcagaaggatgaagaggccgggggcttcaccaccaacttggagccg
gttcccctgtctgaccgggaggtgatctcgcggctgcgcaactgcgtcgtggctctggtc
acggagaagctgatgctgtttgacaccagcatcctgtactgctatgaagcatccctccct
catcagatcaaggacattctcaaaccagaggtgatggaggagatcgttctggaaacccga
cagaggctgctggatgtggagggatag
DBGET
integrated database retrieval system