Dryobates pubescens (Downy woodpecker): 104296490
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Entry
104296490 CDS
T08526
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104296490 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104296490 (U2SURP)
Spliceosome [BR:
dpub03041
]
Complex A
U2 snRNP components
U2 related factors
104296490 (U2SURP)
Complex B
104296490 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
104296490
NCBI-ProteinID:
XP_009894594
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MESKLKAFSIGKMSAAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFV
RGGIVNASKEEHETDEKRGKIYKPSSRFSDQKNQPSQPSNEKPPSLLMIETKKPPLKKGE
KEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSV
LDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARE
RNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPP
PSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEF
VVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMF
KNGSFWRPPPLNPYLHGMSEEQETEAFVEETNKKGALKEEQRDKLEEILRGLTPRKNDIG
DAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRK
FFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLG
LVNIMEDKETEEVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLD
GIPLDAAEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIQNQE
EESEDEEDTQSSKSEEQHIYSNPIKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQD
ELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERDRDKKDKEKSETRSKDKKEKE
ECTPTRKERKRRHSASPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPR
DASKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSSSPHRSHKKSKKSKH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaactcaaagcattcagtattggcaaaatgagtgctgccaaacggactctg
agcaagaaggagcaagaagaattaaaaaagaaggaggatgagaaggctgctgcagaaatt
tatgaagaattccttgctgcctttgaaggaagtgatggtaataaagtgaaaacgtttgta
agaggaggcatcgttaatgcatctaaagaggagcatgaaacagatgaaaaacggggtaaa
atctataagccttcatcacggttttcagatcaaaaaaatcaaccaagccagccatctaat
gagaagcctccatccctcctaatgatagaaacgaaaaagcctcctttgaagaaaggagag
aaagaaaagaaaaagagtaatttggaactttttaaagaagaattaaagcaaatacaagag
gagcgtgatgaaagacacaaaacaaaaggtagattgagtcgttttgagccaccccagtca
gactcagatggccagcgtcgttcaatggatgctccttcaagaagaaacagatcatctgta
ctggatgattatgcaccagggtcacatgatgttggagatccaagcacaacaaatttgtat
cttggaaacattaatcctcaaatgaatgaagagatgttatgtcaagaattcggacgcttt
ggaccactggcaagtgttaaaattatgtggccaagaactgatgaagaaagagcaagagaa
agaaattgtggctttgttgcctttatgaacagaagagatgctgaaagagcattaaagaat
ttaaatggcaagatgattatgtcatttgaaatgaagctaggttggggcaaagctgtacct
ataccaccacacccaatatacattccgccttctatgatggagcataccctcccgcctcct
ccctcaggactgccttttaatgcccagcctagagagagattgaagaatcctaatgctcca
atgttaccaccaccgaaaaacaaggaagattttgagaagactctgtcgcaagccatagtc
aaagtggttatcccaacagaaaggaatttgctcgctttgatacaccgaatgatagagttt
gtggtacgggaagggcctatgtttgaagccatgatcatgaaccgagaaatcaacaacccg
atgttcaggtttttatttgaaaaccagactccagcccatgtatattacagatggaagctt
tattcaattcttcagggagatgctccaaccaagtggaggacagaagatttccgaatgttc
aagaatggatcgttttggaggccaccaccattgaacccgtacttgcatgggatgtcagaa
gagcaagaaacagaagcatttgtggaggaaacaaacaagaagggtgcacttaaggaagaa
cagagggacaaattagaggaaattctgcgtggattaactcctcggaagaacgacattggt
gacgcaatggttttctgtctaaataatgcagaagctgctgaagaaattgtagactgcatt
acagaatcattgtccattctgaagacacctcttccaaagaagattgcaaggttgtatctc
gtgtcagatgtgttatacaactcttcagctaaagttgccaatgcttcctactatagaaaa
ttttttgaaacaaaattatgtcagatattctctgatctcaatgctacttaccgtacaata
caaggccatttacagtctgaaaatttcaagcaacgggtaatgacgtgcttccgagcatgg
gaagactgggcaatctatccagaaccatttctgatcaagctacagaatatattcttgggg
cttgtaaatatcatggaagataaagaaacagaggaagtaccagatgatcttgatggagct
cccattgaggaagagcttgacggtgcaccgctagaagatgtggacggaattcccattgat
gctgctcccattgatgatcttgatggagtcccaattaaatcactggatgatgatctcgat
ggaattcctttggatgcagctgaagactcaaaaaagaatgagcctatctttaaagttgct
ccttcgaagtgggaagcggtggatgaatcagaactggaagctcaagctgttactacttct
aagtgggagctttttgatcaacatgaagaatctgaagaagaggaaattcaaaatcaagaa
gaagaaagtgaagacgaggaagacacacagagttccaagtcagaagaacagcacatatat
tccaatcccattaaagaagaaatgcctgaatccaagtcatcagtcaaatattcagaaatg
agtgaagaaaagcgtgccaaactccgagagatagagcttaaggtgatgaagtttcaggat
gagttagagtctgggaaaagacccaagaaaccaggccagagttttcaggaacaggttgaa
cactatagagacaagctgcttcagagggagaaagaaaaagagttggaaagagagcgggac
agagacaaaaaggacaaggaaaaatctgaaaccaggtccaaagataagaaggaaaaggag
gaatgtacaccaacaagaaaagagaggaaaagacgacacagtgcttcccccagcccctct
cgcagcagtggcagcagacgagcgaaatctccgtcaccgaagtcggaacgctccgaacgc
tccgaacgctcccacaaagagagttctcgttctcggtcgtcacacaaagattctcccaga
gatgccagcaagaaagccaaaaggtcaccgtctggctccaggacacccaaaagatcaaga
aggtcacgatccagatcccctaaaaagtcagggaaaaagtccaggtctcagtccagctct
cctcacagatctcacaagaagtcaaagaaaagcaaacactga
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