Dryobates pubescens (Downy woodpecker): 104296504 Help Entry 104296504         CDS       T08526                                  Symbol COL4A4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism dpub  Dryobates pubescens (Downy woodpecker) Pathway dpub04382   Cornified envelope formation dpub04510   Focal adhesion dpub04512   ECM-receptor interaction dpub04518   Integrin signaling dpub04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:dpub00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104296504 (COL4A4)    04518 Integrin signaling     104296504 (COL4A4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104296504 (COL4A4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104296504 (COL4A4)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     104296504 (COL4A4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:dpub04147]     104296504 (COL4A4)    00536 Glycosaminoglycan binding proteins [BR:dpub00536]     104296504 (COL4A4) Exosome [BR:dpub04147]  Exosomal proteins   Exosomal proteins of other cancer cells    104296504 (COL4A4) Glycosaminoglycan binding proteins [BR:dpub00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104296504 (COL4A4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 CsiV Motif Other DBs NCBI-GeneID:  104296504 NCBI-ProteinID:  XP_009894617 LinkDB All DBs Position Unknown AA seq 1514 aa AA seqDB search MVQTRSAARKCSPQRPSAPSTAQPLLPKPATSREETRSRRSGLQAAAGAERPSQGRLSLA PEAGDEDAPCAAPSPPSLVPARQRREVTVPQMGRDIPHRARLRYPYLFIPQGGYAYLEPC GGQECSLCQCFPEKGSRGQPGDLGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKG DKGPTGVPGFPGLDGVPGLPGSEGPRGKRGPDGCNGSRGDLGFPGENGYVGPRGPYGNPG QKGEKGNSVYVSYFGKGPPGDRGDPGPPGMPGPRGSRGTRGPSGYPGHPGLPGIPGYPGL PGEQGNPGIGVDGQKGEPGNPGSYGPAGFPGMKGETGFAGFPGQPGYPGIQVHKEILGFQ VLLVTWGQLDQSVLQAGWEDQEMTEQEIEASAHVLLVLLVPVVCKDLQVLQERKDKWDTL EDTEKRVIQAYLVQWDLQGTLVILDYHCQVIKDFLESQDFLGLSEELLSGMKTSPECKDL QGNAFLLKNQGDTVCITSPYPGNPGPPGFKGVQGPKGLKGLPGHPGPNGFDGQKGHQGRP GAGIPGPEGFRGETGDPGDEGERGSIIDGKHGPPGSPGVDGQKGVPGDTTYGPPGIPGKR GLPGPPGAQGARGDPGVPGFQGQPGTPGFPGPKGFRGPEGDRGAPGCPGFPGPPCDTGLP GPPGLRGVMGLPGSQGLPGFKGQRGDRGLAGPPGIKGLRGSPGLQGPPGPPGSRGLTGLP GNRGPLGFPGQTGSKGIQGPQGFPGLPGMQGQMGFPGVKGEEGKMGPPGPSGECGDMGLK GERGPPGDSGCVNIRLEKGQKGELGFPGENGLRGERGEKGSTGFRGTPGFPGKNGVPGLP GDHGDTGVMGFPGFQGFPGPKGLRGIGGFQGQPGDQGDIGLPGIPGNPGLTGPKGSKEED LYEIEVIVSQQAGEVTQLLCLVHTVAKDLLEIQDYQDPVDSQEKRAQQVSKDNPENQDPR VTLDTQEYLDFQELQVLKDCQENLERKGNMGFWELQDCLPGLPGLDGLDGLKGRKGSAGA PGQSETGPPGYSGELGPKGDRGEPGWPGISIPGPPGEQGFPGFPGRRGPAGPMGPMGRCP DSASPGPPGDQGPPGLDGIRGHPGNPGPPGETIFVRGDPGDTGFPGAPGKPGQRGQQGAR GLPGKQGREGPKGPMGIHGPQGPPGATGEQGDQGFQGRPGPRGPTGDPGEPGKTDDSCPA IPGPPGEAGQRGEDGSAGLPGPIGHPGPQGRKGEEGSRGLPGQDGLPGAPGPPGDQGNRG EQGYTGPQGPPGQTGIPGPPGPHIRSASGFLLVLHSQSDREPLCPQGMPKLWAGYSLLYL EGQEKAHNQDLGLAGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLASAAPLPVTPLSG EEIEPYISRCAVCEAPAQAVAVHSQDQSIPPCPINWRSLWIGYSFLMHTGSGDQGGGQSL MSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTTVLPELQFAAAPRSGTLKEGQEQ RRKISRCQVCLKHG NT seq 4545 nt NT seq  +upstreamnt  +downstreamnt atggtccagacgagaagtgctgctcgtaagtgttcacctcagagaccatccgcacccagc acagcccagcccttgctgcccaaacccgccacctcccgcgaagagacgcgcagccgccgg tcaggcctccaagccgcagccggggctgagcgtccatcccagggacgcctctccctcgca cctgaggcgggcgacgaggacgcgccctgtgcggcgccctccccaccttccctcgttccc gcccgtcagcggcgcgaggtaacggtaccacagatggggcgggatatacctcaccgtgcc cggctgcgatatccataccttttcattccccagggaggatatgcataccttgagccatgt gggggacaggaatgttcactttgtcagtgctttccagaaaaaggatcaagaggtcagcct ggtgatctgggagctcaaggtccaattgggtccttgggatctacaggaccagctggtcta ccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaaggt gataagggcccaactggagtcccagggtttcctggcttagatggtgttcctgggttacca ggaagtgaaggacccaggggcaagcgtggtccagatggctgcaatggctcaagaggagat ctgggatttccaggcgaaaatggttatgttggaccaagaggtccttatggaaatccagga caaaaaggagaaaagggaaattcagtgtatgtatcatattttggaaaaggacctccagga gacagaggtgatcctggcccccctggcatgcctggacctagagggtcaagaggtacaagg ggcccgtccggatacccaggccacccaggcttgcctggtattccagggtaccctggcttg ccgggtgaacagggaaacccaggtattggagtggatggacaaaagggggagccggggaat cctggctcttatggacctgctggctttcctggaatgaagggggaaacaggatttgctggt tttcctggacagcctggctatccaggcatacaggtccacaaggagatcctgggtttccag gtcctgctggtgacatggggtcagttggaccagtcggtcctgcaggccggctgggaagac caggagatgacggaacaagaaatcgaggcctctgctcatgtactgctggtcctcctggtc cccgtggtgtgcaaggacctccaggtactccaggaaagaaaggacaaatgggataccctg gaagacacggagaaaagggtgatccaggcttatctggtgcaatgggatctccagggcacc ctggtgattctggactaccactgccaggtgataaaggatttcctggagtcccaggacttc ctgggattatcagaggaattactttctgggatgaagactagccctgagtgtaaggattta caaggaaatgcttttctgctgaagaatcagggtgacactgtctgcattacttcaccatac cctggaaatccgggtcccccaggatttaaaggtgttcaaggaccaaagggtttaaaagga ctccctggtcatccgggaccaaatggctttgatggacaaaagggccatcaaggcaggcca ggagcaggaatccctggcccagaaggctttcgaggtgaaactggtgatcctggtgatgaa ggtgaaagaggctcaataattgatggtaaacatggtcctccaggttcacctggtgtagat ggtcagaaaggtgttccaggtgataccacatatggtcctccaggaatcccaggcaagagg ggactgccaggaccccctggtgcacaaggagcaaggggtgatccaggcgttccggggttt caaggacagcctggtaccccaggatttcctggtcccaaaggcttcagaggcccagaaggt gatagaggagcaccaggctgtccaggattccctggtccaccatgtgacacaggcttacca gggccaccaggactcagaggtgtcatgggcctgccaggatctcaaggcttaccaggcttt aaaggtcagagaggagatagaggcctagctgggccacctggaatcaaaggtctcagaggc tctcctggcttacaaggtcccccaggtcctccaggctcccgaggacttaccggactccca ggcaatagaggaccacttggtttcccaggacaaacaggaagcaaaggaattcaaggaccc caaggattcccaggactcccaggaatgcaaggccaaatgggattccctggtgtaaaaggt gaagaaggaaaaatgggtccacctgggcctagtggagaatgtggggatatgggattaaaa ggtgaaagagggcctccaggagacagtggctgtgtgaacattcgtcttgagaaaggacag aagggggaactggggtttcccggtgagaatggacttaggggtgaaagaggtgaaaaaggc agcactggtttcagaggcaccccagggtttccagggaagaatggtgtcccaggattgcca ggtgaccacggtgacactggagtgatggggtttcctggattccagggtttcccgggacca aaaggcttgagaggaattggaggctttcaaggacaaccaggtgaccagggtgacattggc ttgcctggaatccctggaaatccaggactgactggcccaaaagggtctaaagaggaagac ttgtatgaaatagaagtcattgtatctcaacaggcaggagaggtgacccaactcctctgc ttggtgcacacggttgcaaaggacctcctggagatccaggattaccaggaccctgtggat tcccaggagaaaagggctcagcaggtatccaaggacaacccggaaaaccaggatccaagg gtgaccctggatacccaggaatacctggatttccaggagctacaggtcctcaaggattgc caggagaacctggagagaaagggaaacatgggattttgggagctccaggattgtcttcct ggactgcctggtctggatggcttggatggactaaaaggtcgaaaaggttctgcaggagct ccaggtcaaagtgaaacagggcctccaggatactcaggagaacttggaccaaaaggagac agaggtgaacctggatggcctggtatttcaattccaggcccccctggagaacagggattc ccaggattcccaggtagaagaggaccagctggacccatgggacctatgggaagatgtcct gatagtgcttctcctggccctcctggtgatcaaggaccacctggtttggatggaatcaga ggtcaccctgggaaccctggacctcctggagagactatctttgtgcgaggagatcctggt gatactggtttcccaggggcaccaggtaagcctgggcagcgagggcagcaaggagccaga ggtcttccagggaagcaaggaagagaaggcccaaagggtcctatgggaatccatggccca cagggtccacctggtgctaccggagaacaaggagaccaaggttttcaaggaagacctggt cccagaggtcccacaggtgaccctggtgaaccaggaaaaacagatgattcctgccctgca atcccagggcctcctggggaggcagggcaaagaggagaggatggctctgcaggactacca gggccaataggccaccctgggccccaaggacgaaaaggggaagaagggtcacgtggcctg ccaggccaggatggcttaccaggggcacctgggccaccaggtgaccaaggaaacagagga gagcaaggatacacaggaccacaaggtccacctggccagaccggtatcccaggaccacca ggcccccacattagatctgcaagtggcttcttgcttgtccttcacagtcagtcagacaga gaaccactatgtccacaggggatgcctaaattgtgggctggctacagtctgctgtacctg gaaggacaagagaaagctcataatcaagatcttggcttggcaggctcttgtctgcccgtg ttcaacaccatgccctttgcttactgcaatatcaaccaagtctgttactatgccagccgg aacgacaagtcctactggctggccagcgctgcccccttgcccgtgacaccactctcagga gaggagattgagccctacatcagcaggtgtgctgtgtgtgaggccccggcacaggcagtg gcggtgcacagccaggaccagtccattcctccctgccccatcaactggagaagcctctgg ataggatattcctttctgatgcacactgggtctggtgatcagggtggtggacagtcccta atgtcacctggaagctgcctagaagacttcagatcagctccattcatcgaatgccagggc cagcgggggacatgccagttttttgccaacgaatacagcttctggctaactaccgtgctg cccgagctgcagtttgcagcagcccccaggtcaggaactctcaaagaaggccaagagcag aggagaaagatcagtaggtgccaggtgtgcttgaagcatggctag

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