Dryobates pubescens (Downy woodpecker): 104296741
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Entry
104296741 CDS
T08526
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1
KO
K26583
transcriptional-regulating factor 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104296741 (TRERF1)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
104296741 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Myb_DNA-bind_6
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
104296741
NCBI-ProteinID:
XP_009894888
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQHHQMNSLPILNHSYGTSVMDAPQTSPLSPQFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSGSGNHIPVRNNLNSQGAMWSPLGPGESHDGYQYSYS
QPGESRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNSSDSALRQLL
SQKPAVEQQPVTSSVQRYQPLPQQGHQNFASMQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQRQTHAQQMQSPQLLPQQMQHLQQTQYYAQPQQGHQRLSLQEIQQQPTRQQQQCPV
PIAQYYPAQPVMQQLQQQQQQMQLPLPPYHREPDPKAMHEPHQYSQDTSHPVQLIQLGAV
PQYCYQDPHEQYRHLYPQSLLQQQQDQQKQYPSESRVPPLNSHVGLSPAETTEDATLQEL
NSVGNAVPHRTPLPPSGVHLNNKSSQQDSPSTMWPQQAPLSDGRLQPLSPEQSGQNRETL
PDMKNRLMCSVCLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLPKEVDSLAP
IVMPVSVPVKLLSPEPSTQPSASTATVKDKPANSVSDDEMPVLMKMTYSPPCSPKVATPC
SSSEISKKPLQSAVKLEENFKPLQDKKKYRHRPEPLFIPPPSFNFSMSHSGATLYQSQLR
SPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHSTSHTQLPLTPLTPTPR
VLLCRSNSIDGSVFPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVHKATLVWK
PWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEKLLLRKPV
RLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFGFVQKMVKSKTVAQCVEYYYTWK
KILRLGRKHRTRLEKKREECMTSGEEEVLEEDEDIEEDRKEEREMQKSPDPPAIPLVGPI
DLPALQSLSLSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKPRCAVPGAKHKSGT
QSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQ
KAAVAAEMAATIARTTGPVGHSLIPLDHVSLAKHVENVGDIDDDVVQELGDVMEENEVMD
ADLLLDDEDADLLQDDAEL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaaccatactgccaacagcaatgagaacttgtac
taccaacaccaccaaatgaactcccttccaattctaaatcatagctatgggacatctgtt
atggatgctcctcagacatctcctctctcccctcagtttccccaagattcaagagacagt
atagctttgcctgtaggttcaaaaagtcttgggtcaatggacacatctagacaaaccagt
tggacacattctggctcaggaaaccacatcccagtgaggaacaatttgaatagccaaggc
gcaatgtggagccccctcgggccaggggagtctcatgatggataccaatattcttactct
caacccggcgaaagtcgatcacaaaaaattaccagtggggtcctgcataaattggattcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcaacaacatggctcaggtt
ttgcacactgaatcttcaatggtggataattccagcgacagtgcactcaggcagctgctg
tcccagaagccagcggtggagcaacaacctgtgacttccagcgtacaaagataccaacca
ctgccgcagcagggacaccagaattttgcaagtatgcagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtactacgactaccagcagcatctctcgcagatgcagatgcat
tctgcctttcagcagaggcagacgcacgctcaacagatgcagtccccgcagctcttaccg
cagcagatgcagcacttgcagcagactcagtactatgctcagccacagcagggacatcag
cggctctcactacaggagatccagcagcagccaactcggcagcagcagcagtgtccagtg
ccaatagctcagtattacccagcccagcctgtcatgcagcagttacagcagcagcagcaa
cagatgcaattgccgcttcctccgtatcacagggaacctgacccaaaggctatgcatgag
ccacaccagtactctcaggatacaagtcatcctgtgcagcttatccagctgggagcagtg
cctcagtattgctaccaagatccccatgaacagtacaggcacttgtacccacagagttta
ctgcagcagcagcaagatcagcagaagcaatatccaagtgagagcagagtgccgcctctg
aactcccacgttggtctcagtccagcagagaccacagaggatgccacgctgcaagagctt
aattctgtgggtaatgctgtccctcatcgaactcctttgccaccctcaggagttcatttg
aacaataaaagctctcagcaagactctcccagcaccatgtggcctcagcaggcaccactg
tcagatggcagactgcagccactctccccagaacaaagtggccagaacagagaaacactt
cctgatatgaagaacaggctaatgtgttcagtatgcttgaaagagtttaagagtttgcct
gctctcaatggtcacatgaggtcacacggaggagtgagagcatctcctaacttcaaacag
gatgaaggagagaaaccaccacagcagccgctgcctaaagaggtggatagcctcgcaccc
atcgtcatgccagtgtctgtccctgtaaagcttctgtcgcctgagcccagcacacagccc
tctgccagcactgccacagtcaaagacaagcctgccaactctgtgtcagatgatgagatg
cccgttctcatgaagatgacttactctccaccatgcagtccaaaagtggccaccccctgc
tcatcctctgagatcagcaaaaagcctcttcagagtgctgtgaaattggaagaaaacttc
aaaccactgcaggacaagaagaagtatcgacatagacctgagcctctcttcatccctcct
ccttccttcaacttcagcatgtcccactctggtgccaccctgtaccagagtcagctccgc
tctcctcgtgttcttggcgatcacctgctggaccggacgcacgagctgcccccctacact
ccaccgccaatgcttagtccagttcggcaagggtctggcctcttcagcagtgttatcaca
tcatctcatagcacctcacacactcagctgccacttactccactcacacctactccacgt
gtgcttctctgtcggtccaatagtattgatggaagtgtctttccagtgacacctgggcca
ggagaacagactgttgaaccgcgaatcaatattgggtccaggttccaggctgatattcct
gagctgcaggacagactgctaatggagaaagatgtgcacaaggctactttggtgtggaag
ccatggccagaactggagaacaaggttttccaacaaagagtggaagaccttctaaatatg
agctgttccagtgtgttacctggtggaggaactaactcagaatatgctttgcactctctc
tttgaagcaaaaggagatattatggttgctcttgagaagctgctgttgagaaagccagtg
agattgaagtgtcatcctttggcaaattaccactacgcaggctctgacaaatggacacat
caagaaaggaggttgttcaaagaggcattgtccacctacagcaaagattttggctttgta
cagaaaatggttaagtccaagacggttgcacagtgcgtggagtattactacacctggaaa
aagatcttgcgcctgggacggaagcacagaacacggctagagaaaaagagagaggaatgc
atgacaagtggagaagaagaagtgttagaggaagatgaggacatcgaagaagatagaaag
gaagaaagggaaatgcagaagtctcctgacccaccagctatcccccttgttggacctata
gatctgcctgcccttcagagtctgtcactttcttcgtccttcatctgtgaaatgccaaat
tgtggtgctgtgttcagctcccgacaagcactcaatggccatgctcgcatccacggaggt
acgaaccaggtgacgaagccacgctgcgccgtgccaggggctaagcacaaatccggtact
cagagcgggtactgctccatcaagagttcacctgcccacagcaccaccagcggcgagacc
gaccccaccacaatatttccttgcaaggagtgtggcaaggtgtttttcaaaatcaaaagc
cgcaatgctcacatgaagactcacaggcaacaggaagaacagcagaggcagaaggcccag
aaagctgcggtagcagcagaaatggcagccactattgcaagaactactgggccggttggg
catagtttgatccctctggatcacgtgagcttggctaaacacgtggagaacgtgggtgac
attgatgatgatgttgttcaggagctgggtgatgtcatggaggaaaatgaagtcatggat
gctgacctcttgttggatgatgaagatgccgacctgctgcaggatgatgctgagttgtaa
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integrated database retrieval system
