Dryobates pubescens (Downy woodpecker): 104296767
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Entry
104296767 CDS
T08526
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dpub00535
]
104296767
04091 Lectins [BR:
dpub04091
]
104296767
Proteoglycans [BR:
dpub00535
]
Cell surface proteoglycans
Others
104296767
Lectins [BR:
dpub04091
]
C-Type lectins
Others
104296767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
104296767
NCBI-ProteinID:
XP_009894917
LinkDB
All DBs
Position
Unknown
AA seq
1581 aa
AA seq
DB search
MVSFYGHSFVELNKAESSSRTSLQLRFRTSKAHGLLFLAAGKKDYCLMELHSGILQLRIN
FGMEERVLHSQQRSQLNDLAWHLVELHHEHDNVTLVLDKHDRSSVKMPGILYELNVDYGF
YVGGTSKLDVPYLIGALPTFRGCIDDVLFNQLDILMPLRPSPGLKNVHEVSVGCSDEFFA
GEDKPISFFSSRSYISFPSWNVDNGGILECTFQTSAAHGLLLYHPGQAGDFIAMEMEDGL
IKVYVGKRKSRTQLSSHRSVNDSHWHHIQLKYTAEYLQLTLDEETMKKSLPLHSKLPLLK
GSLFVGGVDDSTRSEVIKLELISESLKRAKGGSFKGCLRDLKVNSEKKSLKDVLVTKDIS
AGCETESVFNTNLSLGMAVKNPTVKAAPAFTISPESYVSLGKEDGSHFLVLSNLIVLEGG
QASLESRHIKVSLDFQKLEIHQSQILFEIKKLPSHGDLKLDVEPAQKVNIFTMQDLWQRK
ILYVHDGSEDTYDYFNFSISTSSEKIVLPYLQGNEQHVFRISVIPVNDAPEITLPEGNLL
LVLENSKKHLTSELIKVLDKDTDPVNLSISVLGSLNVDAGFLGNSKHPGKAVTTFSNEDL
REGAIFFVHTGVKNSRIVLRASDGEKVSNTVVLRIMAVSVDYRVVNNSGIQLLQGVTALI
TPMHLAVETNTSLQELEIRYEITEPPQYGEIQRHHSKGEWKQINSFSHRSVQRSRVRYCS
TFKEVQLENITDQFKFKVSVGNRISEEHTFPIKVKWLRYSLLKYNPLELEKSGKKYLNSD
NLFAVIVDLEIPEDELNFKLLSLPKNGQILLNEQPLKKDAVFSQKDISDKKVAYELINRY
REDNHDSFRFLISTKYLVSNLYDFEVHIKSDFGNVILTNNGLIVTEGEGELITSTELFVQ
TPENRTFQYKITQFPKHGKLKLITFSGSFESNDNITTFTNQDIIDKRLMYVHDDSETVFD
GFLATASSEDTGMWANLDPDLEPLSIEIRFNISVQLKNDEKPVRVVDKIFNVVKNGQRLL
TLADLCYHDPDSDFDDGQLLYTRRGISNGDLVLVNDTLHRVYQFKQADLEQKQVLFIHRG
ADFGRFVLFVTDGKHYSSLLLEVNATDPYVRLANNTVLMIFTQLDLIKGCVTYKHDDSNN
LIDMFNFTVHAGDTHLDAGVRVYIYLESHQWPLRIANKNSLLVEEGKPVKISKGKLQVVH
DNSPPSEIVFTVDQLPVHGYIWKFSSEQSDLGADQSPVLSFTQQDVDEGKVQYVQTVSDQ
LEDHFSLDVTNGVQTASGIEISVDIIPRVIPLEVQNFTVIEGQSKALMEDYLKISSRHFA
GLSCEFILTEQPKHGYIENSHAPGRTLTTFTRKQVEQELIYYVHDGSEELMDNFTVIVNN
TELWKQSLPHTVFVTVTAVNDETPVIKVNRILWVWVHSVTEITIDDLCAEDKDSSPSELM
YSISPPTNGHVALKSSPNESILNFTQAHIIEGQLVFVHNGSMSGGFSFQVTDGLNFAPRQ
IFSITAQLLVISLEVNKGLGVFPGCRKPISRHDLKAVTNDINNAGNRTITFIVVTSPKLG
RLIRVNSRNTTQEILSFTQCM
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggtatcattttatggtcatagctttgttgagttgaacaaggcagaatcatcctctcgg
acatcgttacagctgcggtttcgaacaagcaaggctcatggactgctttttcttgctgct
ggaaagaaggattactgtttaatggagctgcattcaggaattctacagctgagaattaac
tttggcatggaggaacgagtactgcattctcaacaaagatctcagttgaatgatttagct
tggcacctggttgaactacatcatgagcatgataatgtgacattggtacttgataaacac
gacagatctagtgtgaaaatgcctggaattctctatgaattaaacgttgattatggattc
tacgtaggtggaactagtaaacttgatgttccctaccttattggagcactacccactttc
cgaggatgtattgatgatgtgttgttcaatcagctagacattctgatgcctctaagacct
tctcctggccttaaaaatgtccatgaagtttcagtgggatgcagtgatgaattctttgca
ggtgaggataaacccattagtttcttcagttccagatcttacatttctttcccatcctgg
aatgttgataatgggggaatcttggagtgtacattccaaacttcagctgcacatggcttg
ctgctataccatcctgggcaagcaggagacttcattgcaatggaaatggaagatggatta
attaaagtctatgttggaaaacgtaagagtagaacccagctttcctctcataggtcagtc
aatgatagtcattggcatcacatccaactgaaatacaccgcagaatatttgcagctgaca
ctggatgaagaaactatgaaaaaatcattgcctctccacagcaagcttccgcttctgaag
ggatctctctttgtaggtggtgtggatgacagcacacgatcagaagtgattaaattagag
ctaatctcagagtctttgaagcgtgccaaaggagggtctttcaaaggttgcttaagagac
ttgaaagtcaattcagaaaagaaatcactgaaggatgttctggtaacaaaggacatttca
gctggctgtgaaacagagagtgtttttaatacaaatctttctttagggatggctgtaaag
aaccctactgtgaaagcagccccagcatttaccatttctcctgaaagctatgtctctcta
ggcaaagaagatggaagccactttttagttctaagcaacttgattgtactagagggagga
caagcttccctggaatctagacatattaaagtcagcttagactttcagaaattagagatt
catcaatcacaaattctttttgaaataaagaaactgccttctcacggagacttgaaacta
gatgttgaaccagcacagaaggtaaatatatttactatgcaggacttatggcaaaggaag
atcctttatgtccacgatggttctgaggacacttatgattattttaatttctccatttct
accagcagtgagaagatagtgcttccatatttacaaggaaatgaacagcatgtgtttcgc
attagtgttattccagtgaacgatgcacctgagatcacacttcctgagggtaacttgctg
cttgttttagagaactcaaagaaacatttgactagtgagctgataaaagttctagataag
gatacagatcctgtgaacctcagtatttcagtacttggaagtctgaacgtagatgcagga
tttttaggaaattcaaagcatcctggaaaagctgttactactttttctaatgaggactta
agagaaggtgctattttctttgtgcacacaggtgtcaagaactcaaggattgttctgagg
gcaagtgatggtgagaaggtgagcaacactgttgtgttacgtatcatggcagtttctgtg
gattacagagttgtcaacaactcaggaatacaactgctccaaggtgttacagctcttatc
acacctatgcatctggcagttgaaacaaatactagcctccaggagctggagatacgttat
gagatcacagagccaccccagtatggagagatccaaaggcatcattcaaagggggaatgg
aagcaaattaactctttttctcaccgctctgttcagcgtagccgtgtgagatactgtagc
acttttaaagaagttcagctggaaaatattactgaccaatttaaattcaaagttagtgta
ggaaacagaatcagtgaagagcacacgtttcctatcaaggtgaaatggttgaggtacagt
ttattgaagtacaatcctctagaacttgaaaaatcaggaaagaagtacttgaattcagac
aacctttttgctgtgattgtggatttggaaatacctgaagatgagcttaattttaaattg
ctgtccctaccgaagaatggacagatactgcttaatgaacagcctttgaagaaagatgca
gtctttagccagaaggacatcagtgataagaaggtagcttatgaattaatcaacagatac
cgtgaagacaaccatgattcatttagattcctcatttctacaaagtatctggtatcaaat
ttatacgactttgaagtccacatcaaatcagattttggaaatgttattttgactaacaat
ggtcttattgttactgaaggtgaaggagagttaataacaagcacagaattgtttgtgcaa
acaccagagaacagaactttccaatataaaattacacagtttcctaagcatgggaaatta
aaactcattacattttcaggctcatttgagagtaatgacaatatcaccactttcactaac
caggatataattgataagcgccttatgtatgtacatgatgactctgaaactgtatttgat
ggatttcttgccactgcttccagtgaagacacaggaatgtgggcaaaccttgatccagac
ttagagcctttgtccatagaaattagattcaacatttctgtccagctgaagaatgatgaa
aaaccagtacgtgtagttgataagatatttaatgtagtgaaaaatgggcagcgattatta
actttggcagatctttgctaccacgatcctgattctgattttgatgatggacagttgctg
tatactagacgtggcatttctaatggggacttggtgctagtgaatgatactttgcacaga
gtctaccaattcaaacaagcagacctggagcaaaagcaagttctgtttatacaccgtggt
gcagattttgggcgttttgtgctctttgtgacagatggcaagcactacagctctttgctt
ctagaagttaatgccactgatccttatgttaggctggcaaataatacagtcctgatgatt
tttactcaacttgatctgataaaggggtgtgtgacctacaagcacgatgacagcaacaac
cttattgacatgtttaacttcacggtccatgctggagatacccatctagatgctggagtg
cgtgtttacatatatttggaaagtcatcagtggccactaaggattgcaaacaaaaacagt
ctcttggttgaagaaggaaaaccagttaaaatcagtaaaggaaaactgcaagttgttcat
gacaacagtcctccatctgagattgtgttcacagtggaccagcttccagtacatggatac
atttggaagttttcctctgaacagagtgatcttggtgctgaccaaagtccagttttaagc
ttcacacagcaagatgttgatgagggcaaagttcagtatgtgcagacagtttctgaccag
ctggaagaccatttttctctggatgtgaccaatggtgtgcaaacagcgagtggaatagag
atctctgtagacatcatccccagagtgattccactggaagtacagaacttcacagtaatt
gaagggcagtcaaaagccctgatggaagactatctaaaaatttctagtagacactttgca
ggactcagctgtgaatttattttaactgagcagccaaaacatggatatattgaaaactct
catgctcctggaagaacacttaccacatttaccagaaaacaggtggagcaagaattaatc
tactatgttcatgatggcagtgaggaactgatggacaattttactgtgatagtaaacaac
acagaactgtggaaacaaagcttgccccatactgtatttgttacagttactgcagtgaat
gatgaaactcctgttataaaagttaacagaattctttgggtctgggtgcattcagttaca
gaaataaccattgatgacctctgtgcagaagacaaggactcctcaccgtcagaactgatg
tattccattagtccacctaccaatgggcacgtggctctgaagtcttctccaaacgagagc
atccttaattttacccaggctcatataattgaagggcagctggtatttgtacacaatgga
tcaatgtctggaggattcagctttcaggtaacagatggtttgaactttgcacctcggcag
atttttagcatcacagctcagttgctggtcattagccttgaagtgaacaaaggactcgga
gtctttccaggttgtaggaaacctatttcccgacatgatctgaaagctgtaaccaatgat
ataaacaatgcaggaaacagaactataacttttattgttgtaacttctccaaaacttgga
aggctgatcagagtaaattcacgtaataccactcaggaaatcctcagtttcacacagtgt
atg
DBGET
integrated database retrieval system
