Dryobates pubescens (Downy woodpecker): 104296827
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Entry
104296827 CDS
T08526
Symbol
USP25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104296827 (USP25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104296827 (USP25)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104296827 (USP25)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104296827 (USP25)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104296827 (USP25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
UBA_4
Motif
Other DBs
NCBI-GeneID:
104296827
NCBI-ProteinID:
XP_009894979
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MMHQQTFLNQLREITGINDIQVLQQALKDSNGNLELAVAFLTAKNAKVPQLEEATYYQTA
LPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVL
EASIAENKASLKRTHPEIWSDSPNPYDRKRQDNCPVGLKNVGNTCWFSAVIQSLFNLLEF
RRLVLNFSPPANAQDLPRNQKEHRNLPFMRELRYLFALLVGSKRKYVDPSRAVEILKDAF
KSNDSQQQDVSEFTHKLLDWLEDAFQIKAEEERDGEKPKNPMVELFYGRFLAVGVLEGKK
FENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSARSGQEHWFTELPPVLTFE
LSRFEFNQALGRPEKIHNKLEFPPILYLDRYMHKNREITRIKRDEIKRLKEYLTVLQQRL
ERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDLGASAPASGTLPVQTSPSTIEQ
QGPSSSDVPSTSPVQRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLEGCLHRWRTEV
ENDTRDLQESISRIHRTIELMYSDKTMVQVPYRLHAVLVHEGQANAGHYWAYIYDHHQGR
WMKYNDISVTKSTWEELERDSFGGYLNASAYCLMYINDKEQYLIQEEFNKETGQILVGMD
TLPSDLRDYVKEDNKRFEKELEEWDAELAQKAQQEKLLSQIPRAPAPSPAPVQAGEPEYL
EQPSRTGTSKHLKEDSIQAINKALAEQEDRGPEAIMDTSSDNAPAQPAPNQRVVEVAIPD
VGTFVIQSEEGGYDDEVMLTPNMQGIIMAIGKARNVYDRCGPEAGFFKAIKLEYTRLLKL
AQEDPPPECDYRLRHAIVYFIQNQAPKKIIERTLLEQFGDHNLSFDERCRNIMKVAQAKL
EMIKPDEVNMEEYERWHQDYKNFRETTMFLMVGLEFFQKKSYMEALLYLIYAYQNNKELL
SKGPYRGHDEELISHYRRECLLKLNEHAAALFESGDDQEVNNGLIIMNELIVPCLPLLLV
DEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKGFNDPPKLPSY
STHELCERYARIMLSLSRTPADGR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaccagcaaacatttttaaatcagctgagggagatcactggtatcaatgacatc
caggtactacaacaggcactaaaggatagcaatggcaatctggagttggctgtggctttc
ctcactgcgaagaatgccaaggttccccagctagaagaggcaacttactatcaaacagcc
cttcctggaaatgacagatacatcagcgtgggcagtcaggcagacaccaatgtgattgat
ctcactggagatgataaagatgatcttcagagggcaattgccttgagtttggaggaatca
aacagggcattcagggagactggaataacagatgaggaacaagccattagcagagttcta
gaagccagtattgcagaaaataaagcaagtttaaaaagaacacatccagagatatggagt
gactctccaaacccttatgatcgaaagcggcaagacaactgcccagtaggattaaagaat
gttggcaacacatgctggtttagtgctgtcattcagtcattatttaacctactggagttt
cgaagactagtgttgaatttcagtcctcctgcaaacgctcaggacttaccccgaaatcaa
aaggagcataggaacctgcctttcatgcgtgaattgaggtacttgtttgcacttctagtt
ggttcgaagagaaaatacgttgacccatcaagagcagttgaaatccttaaagatgctttt
aaatcaaatgattcacagcagcaagatgttagtgaatttacacacaaattattagactgg
ctagaagatgccttccaaataaaagctgaagaagagagggatggagagaaaccaaagaac
ccaatggtagagttgttctatggacgatttctagcagtaggtgtacttgaaggtaaaaaa
tttgaaaacacagaaatgtttggccagtatccactccaggttaatggctttaaagatctg
catgagtgcctagaagctgcgatgattgaaggagaaattgaatctctccattcagaaaac
tctgcaaggtctggtcaggagcactggttcactgagcttcctcctgtcttaacttttgaa
ctatcaagatttgagtttaaccaggctttggggagaccagagaagatacacaacaaatta
gaatttcctccaattttgtatctggacaggtatatgcacaaaaatagagaaataacaaga
attaaacgggatgaaatcaaaagactcaaagagtacctcacagttctacaacagagatta
gaacgatatttaagctatggttctggtcctaaacgattccccttggtagatgtcctgcag
tatgccttggagtttgcttctagcaagccagtgtgcacatctccggttgatgacttaggt
gctagtgcccctgccagtggcacactgccagtccagacctcgcccagcacaatagagcag
caggggccttcatcttcagatgttccaagcacatctcctgtacagagatcagtaatacat
aaaccattcacacaatcacgaattcctcctgatctgcccatgcatccggcaccaaggcac
atcactgaggaagagctgtctgtcttagaaggctgtctacatcgctggaggactgaagta
gagaatgacactagagatttacaagagagtatatctaggatacatcggacaattgaattg
atgtactctgacaaaacaatggtccaagttccttatagattgcacgctgttctagttcat
gaaggtcaagctaatgcaggacactactgggcatatatttatgaccaccaccagggccgg
tggatgaaatacaatgatatttctgtgacaaagtcaacttgggaagaattggaacgggac
tcttttggtggctacttgaatgccagtgcatattgtttaatgtatatcaatgataaggag
caatacttgatacaagaggagtttaacaaagaaacaggacagatcctggttggaatggac
acgctaccttctgatctaagggattatgtcaaagaagacaataaacgttttgagaaagag
cttgaagagtgggatgcagaacttgctcagaaagcacagcaggagaagctgctatctcag
atacccagggcaccagcaccctcacctgctccagttcaagcaggagaaccagaatattta
gagcagccatcaagaactggtacttcaaagcacttaaaagaagattctatacaagcaatc
aataaagctttagctgaacaagaagatagaggtccagaagctataatggatacgagctct
gataatgccccagctcaaccagctcctaaccagcgagttgtagaggtggcgattcctgat
gtagggacttttgtgattcagtcagaggaggggggttatgacgatgaggtcatgctgacc
ccgaacatgcaaggtattatcatggctataggtaaagccaggaatgtttatgacaggtgt
gggccagaagcagggttctttaaggcaattaaattggaatacacacgtttgctgaaatta
gcccaggaagatccgcctcctgaatgtgactaccgcttgcgtcatgcaattgtttacttc
atccaaaatcaagcaccaaagaagataattgaaagaacattactggaacagtttggagat
cacaaccttagctttgatgaaaggtgccgtaacatcatgaaggttgctcaagctaaactt
gaaatgataaagccagatgaagtaaacatggaggaatatgagagatggcatcaagactat
aaaaatttcagggaaacaaccatgtttctcatggtaggattggagtttttccaaaaaaag
agctatatggaagccttgctctacctaatctatgcttaccagaataacaaagaactcttg
tccaaaggcccatacagggggcatgatgaagagctgatatctcactacagacgagaatgt
ttgctaaaactaaatgaacatgctgcagcactgtttgaatcaggagatgatcaggaagta
aacaatggcctgatcattatgaatgagcttattgtcccgtgtttgccattactgctggtg
gatgaaatggaagaaaaagatattgtcgctgtggaagatatgagaaaccgttggtgttcc
tatcttggacaagaaatggaacctaacttgcaagaaaagctgacagatttcctgccaaaa
ctgctagattgttctacagagattaaaggtttcaatgacccgccaaagttaccctcctac
tccacacatgaactgtgtgaaagatacgctcgaatcatgctgtctctcagtcgaactcca
gccgacggaagataa
DBGET
integrated database retrieval system
