Dryobates pubescens (Downy woodpecker): 104296832
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Entry
104296832 CDS
T08526
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104296832
03036 Chromosome and associated proteins [BR:
dpub03036
]
104296832
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104296832
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104296832
SLIK complex
104296832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
104296832
NCBI-ProteinID:
XP_009894986
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
MQRSAVLKKQEQQKSTSSDSGSEEDSSNSEGSADDSSSETEKKKHRDEDWQMSGSVSGTD
SELEEDGEKSSCEDSESDYEPKSKVKSQKPPSRIELKSGKKIAGQKKRQLDSSDDDDYDK
RGSRRQATVNVSYKETEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATG
AATTIYAVEADGDPNIGFEKSKELGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKL
DNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQVVERIIAHSNQKSAAGYPDY
YCKWQGLPYSECSWEDGALIAKKFQACIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQ
PSYIGGNESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQL
YGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNIL
LTTYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNS
LKELWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAK
VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPD
DNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQF
PFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQ
NDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLH
TGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPL
TVGDELLSQFKVANFSNMDEDDIELEPEQNLRNWEEIIPEVQRRRIEEEERQKELEEIYM
LPRMRNCAKQISFNGSEGKRNRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDA
EIRRFIKSYKKFGGPLERLDAIARDAELVDKSEMDLRRLGELVHNGCIKALKDNSFGQER
TGSRLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHF
DVDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYL
IKLLNKDLARKEAQRFTGAGNSKRRKTRTKKNRATKAAKIKEEIKSNSSSPPSEKSDEDD
EDNEDEIVSVKQPHKKIKAEENEKKPESDFGIKKQTEEKRETKEKENKRDLKREKKEKED
KKELKNIKENGEKIKESTQKEKEVKEEKVNEIKSENKEKNKKGSLLNIPVHITATSEPVL
ISEELDQKTFSVTFREKFRRAKAQLEINLATAIKNNKKCFYKVINNKRSTRENLHPLLSA
ERNIVTKDEEKAEVLNAYFALVFSNGSSSSLVTQPHDLEVRKGNQNEVITINEEVVSGLL
HHLEAHKAIGLDGLHPRVLKDLADVLAKPISVAATVLRAAAECMQST
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcagcagtgctcaagaagcaagaacagcagaagtcaacttcatcagacagt
ggttcagaagaggattcatcaaacagtgaaggttctgcagatgactcttccagtgaaacc
gagaagaaaaaacacagagatgaagactggcaaatgtctgggtcagtatcaggaactgat
tctgaattggaggaagatggagagaaaagcagttgtgaagatagtgaatctgactatgag
ccaaaaagcaaggtcaaaagccagaaacctccaagcagaattgagctaaaaagtggcaaa
aagattgcaggacagaaaaagcggcagcttgattcatcagatgatgatgactatgacaag
agagggtctcgtcgccaagccaccgtcaatgttagttacaaagaaactgaagaaaccaag
acagattctgatgatttgttggaagtttgtggagaagatgtcccgcaacctgaagaagat
gaatttgaaactatagagaaatttatggatagtcgaattggccgaaaaggagccactggt
gctgcaaccactatctatgcagttgaggcagatggtgacccaaatattgggtttgaaaag
tcaaaggagctaggagaagtacaatatcttattaaatggaaaggatggtcacacattcat
aatacttgggaaactgaggaaacactgaagcagcaaaatgttaaaggaatgaagaaactg
gacaactataagaaaaaggatcaggaaacaaagcgctggctgaaaaatgcttctccggaa
gatgtggaatattataactgccagcaggaacttacagatgatctacataaacagtatcaa
gtagtggaaaggataattgctcattcaaatcagaaatcagcagctggttatccagattac
tattgcaagtggcagggtctgccttactcagaatgtagctgggaagacggtgctctcatt
gccaaaaagtttcaggcatgtattgatgagtattttagcagaaatcaatccaagactact
ccatttaaggactgcaagattctaaaacagaggccgagatttgttgcactaaagaagcaa
ccatcttatattggggggaatgagagtttagagttaagagattatcaattaaatggactg
aattggcttgctcactcctggtgcaaagggaatagttgtattcttgcagatgaaatgggt
ctgggtaaaacaatacaaacaatttcttttctgaactacttgtttcacgaacatcaactg
tatgggcctttcttgttagtcgtgccactttctaccttgacatcttggcaaagagagatt
caaacttgggctcctcagatgaatgctgtggtttacttaggagatataactagcagaaat
atgataagaactcatgaatggatgcatccacagacgaagcgattaaaatttaatatactt
ctaacaacttatgaaattttgctgaaagataagtcattccttggtggtctgaattgggta
tttataggagttgatgaagctcatcgtttaaaaaatgatgattcccttctctacaagact
ttaatagactttaagtctaatcatcgtcttcttattactggaacccctctgcaaaattct
ctcaaagaactttggtctttgctgcatttcatcatgccagaaaagttttcttcctgggaa
gattttgaagaagagcatggcaaagggagagagtttggttatgcaagtcttcacaaagaa
cttgaaccatttctactcagaagagttaaaaaagatgtagaaaaatctttacctgctaag
gttgaacaaattttgaggatggaaatgagtgcattgcagaagcaatattacaagtggatt
ttaaccaggaattataaagccctgagtaaaggttcaaaaggcagtacctcgggctttttg
aacatcatgatggaactcaagaagtgttgtaaccattgttacctcattaaaccaccggat
gataatgaattctataataaacaggaagctttacagcatttaatacgtagcagtgggaaa
ttaatccttcttgacaagctactgattcgtctacgagaacgtggcaacagagtgctgatt
ttctcccagatggtgaggatgctagacatcctagcagagtatttgaagtatcgtcagttt
ccctttcagagacttgatggatcaataaaaggggaattgaggaaacaagcactggatcat
tttaatgcagaaggatcagaggacttctgcttcttgttgtctaccagagctggagggtta
ggtataaacttggcatctgctgacactgtagttatatttgattctgactggaatccacag
aatgatctgcaagcacaggctagagctcataggattggacagaagaaacaggtaaatatt
tatcggctagtcacaaaaggatcagtagaagaagatattcttgaaagagctaagaaaaag
atggtattagatcacttagtaattcagagaatggacactacagggaaaactgtactacat
acaggctctactccttccagctcaacgccttttaataaggaagagttatcagcaattttg
aagtttggtgctgaggaactttttaaagaacctgaaggagaagaagaggagcctcaggaa
atggatatagatgaaatcctaaagagggctgaaactcgagaaaatgagccaggcccatta
actgtaggagatgagttactttcacagttcaaggtagctaacttttccaatatggatgaa
gatgacattgagctggaaccagaacaaaatttaagaaactgggaagaaatcattccagaa
gttcagcggcgacgaatagaagaggaggaaagacaaaaagagcttgaagaaatatatatg
ctcccaaggatgagaaactgtgcaaaacagatcagctttaatggaagtgaagggaaacgc
aataggagcagaagatattctggatctgatagtgactccatttcagaaagaaaacgacca
aaaaaacgtggacgaccacgaactattcctcgagaaaatattaaaggatttagcgatgca
gagattaggcggtttatcaagagttacaagaaatttggtggcccacttgaaaggttagat
gctatagctagagatgctgagctagttgataaatctgagatggaccttagacgtctagga
gaacttgtacataatggatgcattaaggctttaaaggacaattcctttggacaagaaaga
acaggaagcagacttgggaaagttaaaggcccaacattccgaatatcaggagtgcaggtg
aatgcaaagctagtcatctctcatgaagaagagttagcaccattgcacaaatccattcct
tcagatccagaagaaaggaaaagatatgtcatcccatgccacaccaaggcagctcatttt
gatgtagattggggtaaggaagatgattccaatctgttaataggtatctatgaatatggc
tatggcagctgggaaatgataaaaatggatcctgatctcagtttgacacagaagatttta
cctgatgatccagataagaagccccaggccaagcaattacagacccgtgcagattacctc
attaaattactgaataaagaccttgcgagaaaagaagcacaaagatttactggtgcagga
aattcaaaaaggaggaaaacaagaacgaagaagaacagagcaacaaaagctgcaaaaatt
aaagaagaaataaaaagtaactcctcatcacccccctcagaaaaatctgatgaagatgat
gaggataatgaggatgagattgtttcagtgaaacagccacataaaaaaataaaagcagaa
gaaaatgaaaaaaagcctgagtcagattttggtataaagaaacaaactgaagaaaaaaga
gagacaaaagaaaaagaaaataagagggatctgaaaagggagaaaaaagaaaaagaggat
aagaaagaattaaaaaatatcaaagaaaatggagaaaaaataaaagaatctacacagaaa
gaaaaagaagtaaaggaagaaaaggtaaatgaaatcaaatctgaaaataaagaaaaaaat
aaaaaaggttcattgttgaatattccagttcatattactgcaactagtgaaccagttctt
atatctgaagaactggatcagaagacattcagtgtgacgttcagggagaaatttaggaga
gccaaagcacagctagagatcaacctagccacagccattaagaataataaaaaatgtttc
tataaagtcattaacaacaaaaggagtactagggaaaatctccatcctttattgagtgca
gagagaaacatagtgactaaggatgaggagaaggctgaggtgctgaatgcttactttgcc
ttggtctttagcaatggatccagcagttccctggtcacccagcctcatgacctagaagtc
aggaaggggaatcagaatgaggtcatcacaataaatgaggaagtggtcagtggtctactg
caccacttagaagcacacaaggcaatagggctagatgggctacacccaagggtgctgaag
gatttggcagatgtgcttgccaagccaatttctgttgcagccactgttctaagggcagct
gctgaatgcatgcagagtacatga
DBGET
integrated database retrieval system
