Dryobates pubescens (Downy woodpecker): 104296880
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Entry
104296880 CDS
T08526
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104296880 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104296880 (SMARCA5)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104296880 (SMARCA5)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104296880 (SMARCA5)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104296880 (SMARCA5)
RSF complex
104296880 (SMARCA5)
WICH complex
104296880 (SMARCA5)
B-WICH complex
104296880 (SMARCA5)
NORC complex
104296880 (SMARCA5)
BRF complex
104296880 (SMARCA5)
NuRF complex (fruit fly)
104296880 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
104296880
NCBI-ProteinID:
XP_009895039
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MQEADPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEK
QNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLI
SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV
PTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHR
IKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTN
NCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDI
DILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLL
PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSK
FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT
VEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDE
DIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIE
PPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYY
RKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQ
FIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQ
RRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDE
LRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSS
AQKRKMDGTPDGRGRKKKLKL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagcagatcctacgtatgaggagaaaatgcaaacagacagagcaaacagattt
gagtatctgttgaagcagactgagctgtttgctcatttcattcagcctgctgctcagaaa
actccaacctcacctttgaaaatgaagcctggacgtccacgaataaagaaggatgagaaa
cagaacttgctgtcagttggcgactaccgccatcgtagaacagagcaggaggaagacgag
gagctgttaacagaaagctccaagaccactaacgtctgcactcgattcgaagaatctcca
tcatatgtgaaatggggaaagctgcgggattatcaggtgcgaggactgaactggctcatc
tcactgtatgaaaatggcatcaatgggatcctggcagatgaaatgggtcttgggaagaca
ctgcaaaccatttctcttcttgggtacatgaaacactacagaaatattcctggtcctcac
atggtgttagttcccaagtccactctacacaactggatgaatgaattcaagagatgggta
cctacacttcgagcagtttgtttgataggcgacaaagaccagcgagctgcctttgtcagg
gatgtgttgttgcctggagagtgggatgtctgcgtaacatcatacgaaatgctgatcaaa
gagaagtctgtgttcaaaaagtttaactggagatacctggtcatagacgaagcccacagg
attaagaatgaaaaatcaaagttatcagaaatcgtgagagaattcaagaccacaaatcga
ctgctactgactggaactccgctccagaacaacttacatgaactctgggcacttcttaac
ttccttttgccagatgtctttaactcatctgaagactttgactcatggtttgatacaaac
aactgtctaggagatcagaagttggtggagcgtctccatatggtgctgcggccgttcctc
ctgcggcgcattaaagctgatgtagagaagagcttgcctcccaagaaggaagttaaaatc
tatgtgggtctcagcaaaatgcagcgagaatggtatacccgaatcttaatgaaggacata
gacatactgaattcagctgggaagctggacaaaatgagactgctgaatatcctcatgcag
ctgagaaagtgctgcaaccacccctatctctttgatggagcagagcctgggccaccctac
acaacagatatgcatttggtcaccaacagtggcaaaatggtagtgctggacaaactgctg
cctaaattgaaagaacaaggttcaagagtcttaatcttcagtcagatgacaagagtccta
gatatcttggaagattactgtatgtggcggaattacgagtactgcaggctggatggacag
acaccacacgacgagagacaggcctctattaatgcctataatgaacctggtagctcaaag
tttgtcttcatgttgagtacacgggcaggaggtctcggcatcaatttggctactgccgat
gttgtaattctgtatgattcagactggaatccacaagtagatcttcaggctatggatcga
gcacacaggattggccaaacgaagactgtccgagtgttcaggttcatcacagataacaca
gtggaagaaaggatagtggagcgtgcggaaatgaaactccggctggattctatcgtcatt
cagcaaggaagactggtagatcaaaacctgaacaaacttgggaaggatgaaatgctgcag
atgattagacatggagcaacacacgtgtttgcctcaaaggaaagtgagattacagatgaa
gatattgatcacattttggaaagaggtgcaaagaagactgcggaaatgaacgaaaagctt
tccaagatgggcgagagctccctcaggaatttcacaatggatacggagtccagtgtgtat
aattttgaaggggaagactacagggaaaaacagaagatggcatttacagagtggattgaa
ccacccaaacgagaaagaaaagccaactacgctgtggatgcttacttcagagaggctctt
cgagtcagtgagcccaaagcacccaaggcaccacggcctccaaagcagccaaatgtacag
gattttcagttctttcctccccgcctctttgaactcttggaaaaagaaattctctactac
aggaagacaattgggtacaaggtacctcggaaccctgatttgccaaacgcggctcaagca
caaaaggaagagcagctgaagattgatgaggctgaacctctgaatgatgaagagctagaa
gaaaaagaaaagctgctaacccagggattcactaactggaataagagagattttaaccag
ttcatcaaagctaatgagaagtggggccgtgatgacattgagaacatagcacgagaagta
gaaggaaaaactccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaat
gaactccaagacatagagaagatcatggcccagatagaaagaggagaagccagaattcag
cgacgaatcagcataaaaaaagcacttgatacaaagattggcaggtacaaagcccctttc
caccagctaaggatctcgtatggtaccaacaaggggaagaactacacggaggaggaggat
cgctttctgatctgtatgctgcacaagctgggctttgacaaagagaacgtctacgatgag
ttacggcagtgcatccgcaactccccccagttcagatttgactggttcctcaagtccaga
actgccatggagctgcaaaggagatgcaacactttaatcaccctgattgaaagagaaaac
atggaactggaagaaaaggaaaaggcagagaagaagaaacgtggaccaaaaccatcttcg
gcacagaagcgcaagatggatggtactcctgacgggcgtggaagaaaaaagaagctaaag
ctgtga
DBGET
integrated database retrieval system
