Dryobates pubescens (Downy woodpecker): 104296883
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Entry
104296883 CDS
T08526
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104296883 (ABCE1)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
104296883 (ABCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
AAA_15
AAA_29
RsgA_GTPase
AAA_16
VapE-like_dom
nSTAND3
LdpA_Fe-S-bd
NACHT
AAA_30
Rad17
Fer4_10
Fer4_2
AAA_23
SRP54
TsaE
ORC-CDC6-like
Fer4_21
Fer4_16
Fer4_4
AAA_5
Fer4_7
Fer4_3
AAA_19
UDG-inhib_P56
Fer4_9
Motif
Other DBs
NCBI-GeneID:
104296883
NCBI-ProteinID:
XP_009895042
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTSQSKIAWISETLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGSILDRKDETKTQTVVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELSIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLTPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KNTLANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagttaacaagaattgctattgtcaaccatgacaagtgtaagccaaagaaa
tgccgtcaagaatgcaagaagagttgtcctgtggttcgaatgggaaaactttgcatagaa
gtcacatcacagagcaagatagcatggatctcagaaacactttgtattggttgtggtatt
tgcatcaagaaatgtccttttggagccttgtcaattgttaacttgcctagcaacctggag
aaagaaacaacacatagatattgtgccaatgccttcaaacttcacaggttgcctatccct
cgtccaggggaagtgctgggattggttggaaccaatggtattggaaaatcaactgccttg
aaaattttagcaggaaagcagaagccaaatcttggaaaatatgatgatccacctgactgg
caagaaattttgacttacttccgagggtctgaattgcaaaattattttaccaagattctg
gaagatgacctgaaagctatcattaagcctcaatatgtggaccagattcctaaagctgca
aagggaacagtggggtcaattctggataggaaggatgaaaccaagacacaaactgttgta
tgtcagcagcttgacttaacccatctgaaagaaagaaatgttgaggacctttcaggagga
gaacttcagcgatttgcttgcgcagttgtttgcattcagaaggctgatatcttcatgttt
gatgaaccttcaagctacctggatgtcaagcagcgcttgaaggctgccattactattcga
tccctaataaaccctgacaggtacattattgttgtagagcatgatctaagtgtgttagat
tatctctctgactttatctgctgcctgtatggtgtgccaagtgcttatggtgttgttact
atgcctttcagcgtaagagaaggcataaacattttcttagatggctacgttccaacagaa
aatctaaggtttcgagatgcatctctggtgtttaaggtggctgagacagctaatgaggaa
gaagtgaaaaagatgtgtatgtacaaatacccaggaatgaaaaaaaagatgggagaattt
gaactgtccatagtagctggagaattcactgactctgaaattatggtgatgttaggggaa
aatggaactggcaaaactaccttcatccgaatgcttgcaggaagactgacacctgatgaa
ggaggtgaggttccagttctaaatgtcagctacaaaccacagaagatcagtcctaaatct
acgggaagcgtgcgtcagctgctgcatgagaagatcagagatgcctacacacacccccag
tttgtaactgatgtgatgaaacctcttcaaatagaaaatatcattgaccaggaggttcag
acgttgtctggtggcgagttgcagcgcgttgcgttagctctttgtcttggaaagcctgca
gatgtctacctgatcgacgaaccgtcggcgtacctggactctgagcaacgtctgatggcc
gctcgagtcatcaagcgtttcattctccatgctaaaaaaacagcttttgtggtagaacat
gattttatcatggccacctatcttgcagatcgtgtgattgtttttgatggtatcccttcc
aagaacacacttgccaacagtcctcagactcttttggctggaatgaataagtttttatct
caacttgaaatcacttttagaagagaccccaacaattacagaccaagaataaacaaactc
aactcgatcaaggatgtggaacaaaagaagagtggaaactactttttcctggatgactaa
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integrated database retrieval system
